RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 MCUR1Q96AQ8 359 aa14.78□□□□□ -0.04
TPM3-205ENST00000328159 CMTM5Q96DZ9 223 aa14.78□□□□□ -0.04
TPM3-205ENST00000328159 LRIG1Q96JA1 1093 aa14.78□□□□□ -0.04
TPM3-205ENST00000328159 ELOVL2Q9NXB9 296 aa14.78□□□□□ -0.04
TPM3-205ENST00000328159 OBP2AQ9NY56 170 aa14.78□□□□□ -0.04
TPM3-205ENST00000328159 GDE1Q9NZC3 331 aa14.78□□□□□ -0.04
TPM3-205ENST00000328159 PKD2L2Q9NZM6 624 aa14.78□□□□□ -0.04
TPM3-205ENST00000328159 CDH22Q9UJ99 828 aa14.78□□□□□ -0.04
TPM3-205ENST00000328159 KIF26AQ9ULI4 1882 aaPredicted RBP14.78□□□□□ -0.04
TPM3-205ENST00000328159 ANKRD12Q6UB98 2062 aa14.77□□□□□ -0.04
TPM3-205ENST00000328159 SLC25A14O95258 325 aaPredicted RBP14.77□□□□□ -0.05
TPM3-205ENST00000328159 TRIM16O95361 564 aa14.77□□□□□ -0.05
TPM3-205ENST00000328159 ZNF30P17039 623 aa14.77□□□□□ -0.05
TPM3-205ENST00000328159 COPAP53621 1224 aa14.77□□□□□ -0.05
TPM3-205ENST00000328159 MXRA7P84157 204 aa14.77□□□□□ -0.05
TPM3-205ENST00000328159 RAB30Q15771 203 aa14.77□□□□□ -0.05
TPM3-205ENST00000328159 GAB4Q2WGN9 574 aa14.77□□□□□ -0.05
TPM3-205ENST00000328159 ATP13A5Q4VNC0 1218 aa14.77□□□□□ -0.05
TPM3-205ENST00000328159 ANKS6Q68DC2 871 aa14.77□□□□□ -0.05
TPM3-205ENST00000328159 TXNDC11Q6PKC3 985 aa14.77□□□□□ -0.05
TPM3-205ENST00000328159 CPSF7Q8N684 471 aaKnown RBP14.77□□□□□ -0.05
TPM3-205ENST00000328159 NXPE3Q969Y0 559 aa14.77□□□□□ -0.05
TPM3-205ENST00000328159 ULK4Q96C45 1275 aa14.77□□□□□ -0.05
TPM3-205ENST00000328159 C1orf21Q9H246 121 aa14.77□□□□□ -0.05
TPM3-205ENST00000328159 ZNF385DQ9H6B1 395 aa14.77□□□□□ -0.05
TPM3-205ENST00000328159 MEAF6Q9HAF1 191 aa14.77□□□□□ -0.05
TPM3-205ENST00000328159 TRPV4Q9HBA0 871 aa14.77□□□□□ -0.05
TPM3-205ENST00000328159 G3BP2Q9UN86 482 aaKnown RBP14.77□□□□□ -0.05
TPM3-205ENST00000328159 OTOL1A6NHN0 477 aaPredicted RBP14.76□□□□□ -0.05
TPM3-205ENST00000328159 PRRT4C9JH25 899 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 SLC22A2O15244 555 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 WFS1O76024 890 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 CDK14O94921 469 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 RPS17P08708 135 aaKnown RBP14.76□□□□□ -0.05
TPM3-205ENST00000328159 FCARP24071 287 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 NFKBIAP25963 317 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 PGM1P36871 562 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 NSG1P42857 185 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 RGS4P49798 205 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 HK3P52790 923 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 INHBCP55103 352 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 NAA20P61599 178 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 MESP2Q0VG99 397 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 PDGFRLQ15198 375 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 DNAL1Q4LDG9 190 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 ZNF805Q5CZA5 627 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 ARHGAP24Q8N264 748 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 ZBTB2Q8N680 514 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 ZNF366Q8N895 744 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 ST13P5Q8NFI4 369 aaPredicted RBP14.76□□□□□ -0.05
TPM3-205ENST00000328159 CEP70Q8NHQ1 597 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 HCAR2Q8TDS4 363 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 ACTRT2Q8TDY3 377 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 NSUN5Q96P11 429 aaKnown RBP14.76□□□□□ -0.05
TPM3-205ENST00000328159 CATSPER2Q96P56 530 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 COPS8Q99627 209 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 FAM83CQ9BQN1 747 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 C1QTNF3Q9BXJ4 246 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 MMADHCQ9H3L0 296 aaPredicted RBP14.76□□□□□ -0.05
TPM3-205ENST00000328159 PCDH12Q9NPG4 1184 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 THG1LQ9NWX6 298 aaKnown RBP14.76□□□□□ -0.05
TPM3-205ENST00000328159 NUDT4Q9NZJ9 180 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 CD274Q9NZQ7 290 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 DEC1Q9P2X7 70 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 DKK3Q9UBP4 350 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 PLA2G4CQ9UP65 541 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 CEP290O15078 2479 aa14.76□□□□□ -0.05
TPM3-205ENST00000328159 NCF1BA6NI72 391 aaPredicted RBP14.75□□□□□ -0.05
TPM3-205ENST00000328159 C16orf96A6NNT2 1141 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 NCF1CA8MVU1 366 aaPredicted RBP14.75□□□□□ -0.05
TPM3-205ENST00000328159 MEI4A8MW99 385 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 RFXAPO00287 272 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 PPP6CO00743 305 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 SNX2O60749 519 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 FGF4P08620 206 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 COX4I1P13073 169 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 NCF1P14598 390 aaPredicted RBP14.75□□□□□ -0.05
TPM3-205ENST00000328159 XPAP23025 273 aaPredicted RBP14.75□□□□□ -0.05
TPM3-205ENST00000328159 DGKAP23743 735 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 PIK3R1P27986 724 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 SH3BP2P78314 561 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 CLCQ05315 142 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 LCP2Q13094 533 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 WASHC2DQ5SRD0 308 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 GPRC6AQ5T6X5 926 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 TMEM198Q66K66 360 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 CLEC6AQ6EIG7 209 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 ADAMTSL2Q86TH1 951 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 CLYBLQ8N0X4 340 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 TRPC4APQ8TEL6 797 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 ZNF483Q8TF39 744 aaPredicted RBP14.75□□□□□ -0.05
TPM3-205ENST00000328159 PPP2R3CQ969Q6 453 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 SLC28A3Q9HAS3 691 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 MID1IP1Q9NPA3 183 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 CD84Q9UIB8 345 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 TSR3Q9UJK0 312 aaKnown RBP14.75□□□□□ -0.05
TPM3-205ENST00000328159 PLXNA2O75051 1894 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 KIAA1549LQ6ZVL6 1849 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 IGLV3-16A0A075B6K0 115 aa14.75□□□□□ -0.05
TPM3-205ENST00000328159 MAGEC1O60732 1142 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms