RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 VPS35Q96QK1 796 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 APOOQ9BUR5 198 aa15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 INTS10Q9NVR2 710 aaKnown RBP15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 NFKBIL1Q9UBC1 381 aaPredicted RBP15.22■□□□□ 0.03
PDLIM5-202ENST00000318007 CEP192Q8TEP8 1941 aa15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 IQANK1A0A1B0GTG1 560 aa15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 PFDN6O15212 129 aa15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 KRT37O76014 449 aa15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 KRT38O76015 456 aa15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 RHOBTB1O94844 696 aa15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 ALDOAP04075 364 aaKnown RBP15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 ATP1B2P14415 290 aaPredicted RBP15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 NSG1P42857 185 aa15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 RNF187Q5TA31 235 aaPredicted RBP15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 HECTD2Q5U5R9 776 aa15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 ENPP7Q6UWV6 458 aa15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 BMP8AQ7Z5Y6 402 aa15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 ADGRG6Q86SQ4 1221 aa15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 WDR5BQ86VZ2 330 aa15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 LMNTD2Q8IXW0 634 aa15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 SIDT2Q8NBJ9 832 aaKnown RBP15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 TMEM145Q8NBT3 493 aa15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 SLC30A3Q99726 388 aa15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 VIPAS39Q9H9C1 493 aa15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 PCMTD2Q9NV79 361 aa15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 SMOXQ9NWM0 555 aa15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 NOVA2Q9UNW9 492 aaKnown RBP15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 DNAJC16Q9Y2G8 782 aa15.21■□□□□ 0.03
PDLIM5-202ENST00000318007 PRAMEF26H0Y7S4 382 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 SP9P0CG40 484 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 PPARGP37231 505 aaPredicted RBP15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 CCR5P51681 352 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 THOP1P52888 689 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 SLC12A2P55011 1212 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 TAS2R39P59534 338 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 IRF9Q00978 393 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 NAB1Q13506 487 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 BOP1Q14137 746 aaKnown RBP15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 AGERQ15109 404 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 TTMPQ5BVD1 217 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 LDLRAP1Q5SW96 308 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 PRAMEF14Q5SWL7 426 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 ZNF449Q6P9G9 518 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 TMEM220Q6QAJ8 160 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 ADAMTSL4Q6UY14 1074 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 LPCAT2Q7L5N7 544 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 RAVER1Q8IY67 606 aaKnown RBP15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 SLC22A18ASQ8N1D0 253 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 TSACCQ96A04 125 aaPredicted RBP15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 PDXPQ96GD0 296 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 ORAI3Q9BRQ5 295 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 TEX101Q9BY14 249 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 SLC13A1Q9BZW2 595 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 ROPN1BQ9BZX4 212 aaPredicted RBP15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 P2RY12Q9H244 342 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 VPS11Q9H270 941 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 ROPN1Q9HAT0 212 aaPredicted RBP15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 SNX15Q9NRS6 342 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 PHPT1Q9NRX4 125 aaPredicted RBP15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 EURLQ9NYK6 297 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 ZNHIT2Q9UHR6 403 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 R4GN57 208 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 KNL1Q8NG31 2342 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 CFAP99D6REC4 459 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 CACNB4O00305 520 aaPredicted RBP15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 FUCA1P04066 466 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 SNRPAP09012 282 aaKnown RBP15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 THEGLP0DJG4 465 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 RALBP11234 206 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 MYCLP1P12525 358 aaPredicted RBP15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 PKMP14618 531 aaKnown RBP15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 TYK2P29597 1187 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 TRIM23P36406 574 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 SLC36A4Q6YBV0 504 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 LILRA3Q8N6C8 439 aaPredicted RBP15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 GAB3Q8WWW8 586 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 TCF12Q99081 682 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 GPR21Q99679 349 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 C19orf43Q9BQ61 176 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 MCMBPQ9BTE3 642 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 FGF22Q9HCT0 170 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 GNPTGQ9UJJ9 305 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 ZNF180Q9UJW8 692 aa15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 PNMA8BQ9ULN7 279 aaPredicted RBP15.2■□□□□ 0.02
PDLIM5-202ENST00000318007 SPAG7O75391 227 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 TCEA3O75764 348 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 SYF2O95926 243 aaKnown RBP15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 PYGBP11216 843 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 KRT4P19013 534 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 HPDP32754 393 aaPredicted RBP15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 CSNK1EP49674 416 aaKnown RBP15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 GTF2H3Q13889 308 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 LYPLAL1Q5VWZ2 237 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 TAOK1Q7L7X3 1001 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 CHST15Q7LFX5 561 aaPredicted RBP15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 CADM4Q8NFZ8 388 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 COX14Q96I36 57 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 GPR22Q99680 433 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 AARSD1Q9BTE6 412 aaKnown RBP15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 C12orf65Q9H3J6 166 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms