RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 PCDHGA4Q9Y5G9 962 aa15.34■□□□□ 0.05
FOXR1-201ENST00000317011 LILRA5A6NI73 299 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 HACD1B0YJ81 288 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 KMOO15229 486 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 C9P02748 559 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 TNNT1P13805 278 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 BRAFP15056 766 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 ZNF7P17097 686 aaPredicted RBP15.33■□□□□ 0.04
FOXR1-201ENST00000317011 UGT1A3P35503 534 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 TMEM115Q12893 351 aaPredicted RBP15.33■□□□□ 0.04
FOXR1-201ENST00000317011 XRCC4Q13426 336 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 NFATC2Q13469 925 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 PPP2R5EQ16537 467 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 ATP13A5Q4VNC0 1218 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 ODF2Q5BJF6 829 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 ALS2CLQ60I27 953 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 C11orf63Q6NUN7 778 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 ZNF567Q8N184 647 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 P3H4Q92791 437 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 ART4Q93070 314 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 OXNAD1Q96HP4 312 aaPredicted RBP15.33■□□□□ 0.04
FOXR1-201ENST00000317011 TIMM29Q9BSF4 260 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 SLC12A9Q9BXP2 914 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 GOLPH3Q9H4A6 298 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 SLC39A1Q9NY26 324 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.33■□□□□ 0.04
FOXR1-201ENST00000317011 OGFRQ9NZT2 677 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 PILRAQ9UKJ1 303 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 EFR3BQ9Y2G0 817 aa15.33■□□□□ 0.04
FOXR1-201ENST00000317011 REXO2Q9Y3B8 237 aaKnown RBP15.33■□□□□ 0.04
FOXR1-201ENST00000317011 EFCAB7A8K855 629 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 SNX2O60749 519 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 KCNJ13O60928 360 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 CDK14O94921 469 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 ANKRD34CP0C6C1 535 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 ITGB6P18564 788 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 NFKB1P19838 968 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 RAB15P59190 212 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 COPS2P61201 443 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 LLGL1Q15334 1064 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 SLC1A5Q15758 541 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 SIRPB2Q5JXA9 342 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 DCAF12Q5T6F0 453 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 AGAP9Q5VTM2 703 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 ZDHHC20Q5W0Z9 365 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 KAZNQ674X7 775 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 TMEM26Q6ZUK4 368 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 BBS12Q6ZW61 710 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 PID1Q7Z2X4 250 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 VASH2Q86V25 355 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 LRRTM4Q86VH4 590 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 PHYKPLQ8IUZ5 450 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 BRSK1Q8TDC3 778 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 HTR3CQ8WXA8 447 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 NCSTNQ92542 709 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 KRT35Q92764 455 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 RTP4Q96DX8 246 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 TEFMQ96QE5 360 aaKnown RBP15.32■□□□□ 0.04
FOXR1-201ENST00000317011 ZPBPQ9BS86 351 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 TBC1D10AQ9BXI6 508 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 STN1Q9H668 368 aaKnown RBP15.32■□□□□ 0.04
FOXR1-201ENST00000317011 BPIFA1Q9NP55 256 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 LUC7LQ9NQ29 371 aaKnown RBP15.32■□□□□ 0.04
FOXR1-201ENST00000317011 TRHDEQ9UKU6 1024 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 TFR2Q9UP52 801 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 DNMT3AQ9Y6K1 912 aaPredicted RBP15.32■□□□□ 0.04
FOXR1-201ENST00000317011 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.32■□□□□ 0.04
FOXR1-201ENST00000317011 SLC30A1Q9Y6M5 507 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 ZFC3H1O60293 1989 aaKnown RBP15.32■□□□□ 0.04
FOXR1-201ENST00000317011 SDK2Q58EX2 2172 aa15.32■□□□□ 0.04
FOXR1-201ENST00000317011 GAPDHSO14556 408 aaPredicted RBP15.31■□□□□ 0.04
FOXR1-201ENST00000317011 MTX2O75431 263 aa15.31■□□□□ 0.04
FOXR1-201ENST00000317011 CA5AP35218 305 aa15.31■□□□□ 0.04
FOXR1-201ENST00000317011 MARCKSL1P49006 195 aa15.31■□□□□ 0.04
FOXR1-201ENST00000317011 MPP3Q13368 585 aa15.31■□□□□ 0.04
FOXR1-201ENST00000317011 MSLNQ13421 630 aaPredicted RBP15.31■□□□□ 0.04
FOXR1-201ENST00000317011 NOMO1Q15155 1222 aa15.31■□□□□ 0.04
FOXR1-201ENST00000317011 TBR1Q16650 682 aa15.31■□□□□ 0.04
FOXR1-201ENST00000317011 ANKS6Q68DC2 871 aa15.31■□□□□ 0.04
FOXR1-201ENST00000317011 RANBP10Q6VN20 620 aa15.31■□□□□ 0.04
FOXR1-201ENST00000317011 KIAA1328Q86T90 577 aa15.31■□□□□ 0.04
FOXR1-201ENST00000317011 ZC3H18Q86VM9 953 aaKnown RBP15.31■□□□□ 0.04
FOXR1-201ENST00000317011 PLXDC1Q8IUK5 500 aa15.31■□□□□ 0.04
FOXR1-201ENST00000317011 CALR3Q96L12 384 aaKnown RBP15.31■□□□□ 0.04
FOXR1-201ENST00000317011 QKIQ96PU8 341 aaKnown RBP eCLIP15.31■□□□□ 0.04
FOXR1-201ENST00000317011 GORASP1Q9BQQ3 440 aa15.31■□□□□ 0.04
FOXR1-201ENST00000317011 SLC40A1Q9NP59 571 aa15.31■□□□□ 0.04
FOXR1-201ENST00000317011 HACD3Q9P035 362 aa15.31■□□□□ 0.04
FOXR1-201ENST00000317011 PCDHA3Q9Y5H8 950 aa15.31■□□□□ 0.04
FOXR1-201ENST00000317011 MN1Q10571 1320 aaPredicted RBP15.31■□□□□ 0.04
FOXR1-201ENST00000317011 RCCD1A6NED2 376 aa15.3■□□□□ 0.04
FOXR1-201ENST00000317011 BTNL10A8MVZ5 291 aa15.3■□□□□ 0.04
FOXR1-201ENST00000317011 APOC4-APOC2K7ER74 178 aa15.3■□□□□ 0.04
FOXR1-201ENST00000317011 TOX3O15405 576 aaPredicted RBP15.3■□□□□ 0.04
FOXR1-201ENST00000317011 PPFIA2O75334 1257 aa15.3■□□□□ 0.04
FOXR1-201ENST00000317011 APOC2P02655 101 aa15.3■□□□□ 0.04
FOXR1-201ENST00000317011 HLA-DPA1P20036 260 aa15.3■□□□□ 0.04
FOXR1-201ENST00000317011 CHRNA4P43681 627 aa15.3■□□□□ 0.04
FOXR1-201ENST00000317011 DMPKQ09013 629 aa15.3■□□□□ 0.04
FOXR1-201ENST00000317011 ZSCAN1Q8NBB4 408 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms