RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 EPGNQ6UW88 154 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 SCIMPQ6UWF3 145 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 Q6ZNB5 142 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 DET1Q7L5Y6 550 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 CHST15Q7LFX5 561 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 TRIM74Q86UV6 250 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 TRIM73Q86UV7 250 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 KYQ8NBH2 561 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 CHST14Q8NCH0 376 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 OVCA2Q8WZ82 227 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 TADA1Q96BN2 335 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 PPWD1Q96BP3 646 aaKnown RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 KCNA7Q96RP8 456 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 SOX17Q9H6I2 414 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 TDP1Q9NUW8 608 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 ZDHHC7Q9NXF8 308 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 NCKIPSDQ9NZQ3 722 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 CCDC167Q9P0B6 97 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 CIDEBQ9UHD4 219 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 DOLKQ9UPQ8 538 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 ZNF711Q9Y462 761 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 FRYLO94915 3013 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 OTOL1A6NHN0 477 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 SAC3D1A6NKF1 404 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 WASH3PC4AMC7 463 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 SLC7A4O43246 635 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 ZNF821O75541 412 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 HNRNPCP07910 306 aaKnown RBP eCLIP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 TYRP14679 529 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 FUT4P22083 530 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 RPL5P46777 297 aaKnown RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 AGTR2P50052 363 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 POU4F1Q01851 419 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 NAB1Q13506 487 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 CYLC2Q14093 348 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 OR4D1Q15615 310 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 PLEKHG6Q3KR16 790 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 FUT11Q495W5 492 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 TMEM215Q68D42 235 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 B3GNT6Q6ZMB0 384 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 DPY19L3Q6ZPD9 716 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 ISCA2Q86U28 154 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 CCDC117Q8IWD4 279 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 LSMEM2Q8N112 164 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 STYXQ8WUJ0 223 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 EEF1AKMT1Q8WVE0 214 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 DGCR14Q96DF8 476 aaKnown RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 SLC29A1Q99808 456 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 CCT7Q99832 543 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 C2orf49Q9BVC5 232 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 EMILIN2Q9BXX0 1053 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 ADGRE3Q9BY15 652 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 ILKAPQ9H0C8 392 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 MRPL46Q9H2W6 279 aaKnown RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 MFSD1Q9H3U5 465 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 COQ10BQ9H8M1 238 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 COMMD8Q9NX08 183 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 DNAJC28Q9NX36 388 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 MKS1Q9NXB0 559 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 MBD1Q9UIS9 605 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 RIMS3Q9UJD0 308 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 ZNF839A8K0R7 811 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 PDLIM1O00151 329 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 UBFD1O14562 309 aaKnown RBP7.54□□□□□ -1.2
TRIM55-202ENST00000315962 TIPRLO75663 272 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 TRIM16O95361 564 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 GUCA1CO95843 209 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 GNAO1P09471 354 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 LTA4HP09960 611 aaKnown RBP7.54□□□□□ -1.2
TRIM55-202ENST00000315962 LPOP22079 712 aaPredicted RBP7.54□□□□□ -1.2
TRIM55-202ENST00000315962 HNF1BP35680 557 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 STC1P52823 247 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 METAP1P53582 386 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 YBX1P67809 324 aaKnown RBP7.54□□□□□ -1.2
TRIM55-202ENST00000315962 HTRA4P83105 476 aaPredicted RBP7.54□□□□□ -1.2
TRIM55-202ENST00000315962 BCL2L1Q07817 233 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 TSNQ15631 228 aaKnown RBP7.54□□□□□ -1.2
TRIM55-202ENST00000315962 INSCQ1MX18 579 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 ZNF423Q2M1K9 1284 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 C5orf22Q49AR2 442 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 LIPMQ5VYY2 423 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 NCEH1Q6PIU2 408 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 ZYG11AQ6WRX3 759 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 KLHDC8BQ8IXV7 354 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 TRIML2Q8N7C3 387 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 CALML6Q8TD86 181 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 JADE3Q92613 823 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 CLP1Q92989 425 aaKnown RBP7.54□□□□□ -1.2
TRIM55-202ENST00000315962 CDK15Q96Q40 435 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 MCOLN1Q9GZU1 580 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 CCDC68Q9H2F9 335 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 SEMA4BQ9NPR2 832 aaPredicted RBP7.54□□□□□ -1.2
TRIM55-202ENST00000315962 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.54□□□□□ -1.2
TRIM55-202ENST00000315962 FNIP2Q9P278 1114 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 MED16Q9Y2X0 877 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 KNL1Q8NG31 2342 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 MYLKQ15746 1914 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 PATJQ8NI35 1801 aa7.54□□□□□ -1.2
TRIM55-202ENST00000315962 NPIPB15A6NHN6 443 aaPredicted RBP7.54□□□□□ -1.2
TRIM55-202ENST00000315962 A8MT66 165 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms