RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 H0YAE9 185 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 KERAO60938 352 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 SERPINB7O75635 380 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 CDKN1CP49918 316 aaPredicted RBP7.76□□□□□ -1.17
CNOT4-201ENST00000315544 MAP3K7CLP57077 242 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 DEFB103AP81534 67 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 BOP1Q14137 746 aaKnown RBP7.76□□□□□ -1.17
CNOT4-201ENST00000315544 ZNF648Q5T619 568 aaPredicted RBP7.76□□□□□ -1.17
CNOT4-201ENST00000315544 HECTD2Q5U5R9 776 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 ZNF770Q6IQ21 691 aaPredicted RBP7.76□□□□□ -1.17
CNOT4-201ENST00000315544 FAM181AQ8N9Y4 354 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 OR4C15Q8NGM1 316 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 SMARCD1Q96GM5 515 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 PCDHB8Q9UN66 801 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 PCDHB3Q9Y5E6 796 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 SH3PXD2BA1X283 911 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 EEF2KO00418 725 aaKnown RBP7.76□□□□□ -1.17
CNOT4-201ENST00000315544 ADAM23O75077 832 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 UBTFL6P0CB48 400 aaPredicted RBP7.76□□□□□ -1.17
CNOT4-201ENST00000315544 SLC5A3P53794 718 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 NAGLUP54802 743 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 SP4Q02446 784 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 USP10Q14694 798 aaKnown RBP7.76□□□□□ -1.17
CNOT4-201ENST00000315544 SFRP1Q8N474 314 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 PPP1R16BQ96T49 567 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 CDRT15Q96T59 188 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 GRIP2Q9C0E4 1043 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 FBXO8Q9NRD0 319 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 NDE1Q9NXR1 346 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 NCKIPSDQ9NZQ3 722 aa7.76□□□□□ -1.17
CNOT4-201ENST00000315544 H7C0C1 242 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 PHGDHO43175 533 aaKnown RBP7.75□□□□□ -1.17
CNOT4-201ENST00000315544 ABCB1P08183 1280 aaPredicted RBP7.75□□□□□ -1.17
CNOT4-201ENST00000315544 KITP10721 976 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 CHRM3P20309 590 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 PMLP29590 882 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 ATP5OP48047 213 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 LHX1P48742 406 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 EPHA5P54756 1037 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 EXOSC6Q5RKV6 272 aaKnown RBP7.75□□□□□ -1.17
CNOT4-201ENST00000315544 FAHD1Q6P587 224 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 LILRA6Q6PI73 481 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 LMNTD2Q8IXW0 634 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 DCP1BQ8IZD4 617 aaKnown RBP7.75□□□□□ -1.17
CNOT4-201ENST00000315544 APPL2Q8NEU8 664 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 PPP1R13LQ8WUF5 828 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 HMCESQ96FZ2 354 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 C7orf34Q96L11 122 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 GCNAQ96QF7 691 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 SMIM14Q96QK8 99 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 PHF12Q96QT6 1004 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 OSBPL10Q9BXB5 764 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 DUSP21Q9H596 190 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 CLMPQ9H6B4 373 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 ENTPD7Q9NQZ7 604 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 NSMCE4AQ9NXX6 385 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.75□□□□□ -1.17
CNOT4-201ENST00000315544 A0A1W2PP18 115 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 NDST3O95803 873 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 ZCCHC18P0CG32 403 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 SKIP12755 728 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 ETS2P15036 469 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 CPB1P15086 417 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 GGT1P19440 569 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 OGNP20774 298 aaKnown RBP7.75□□□□□ -1.17
CNOT4-201ENST00000315544 RPS3P23396 243 aaKnown RBP eCLIP7.75□□□□□ -1.17
CNOT4-201ENST00000315544 SLC6A12P48065 614 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 ERVPABLB-1P60509 514 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 USP39Q53GS9 565 aaKnown RBP7.75□□□□□ -1.17
CNOT4-201ENST00000315544 LETMD1Q6P1Q0 360 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 RBM44Q6ZP01 1051 aaKnown RBP7.75□□□□□ -1.17
CNOT4-201ENST00000315544 SPATA24Q86W54 205 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 ZNF280BQ86YH2 543 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 CANT1Q8WVQ1 401 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 GTF2H4Q92759 462 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 DHRS1Q96LJ7 313 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 RAD9AQ99638 391 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 NUF2Q9BZD4 464 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 IARS2Q9NSE4 1012 aaKnown RBP7.75□□□□□ -1.17
CNOT4-201ENST00000315544 TBCCD1Q9NVR7 557 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 EIF4E1BA6NMX2 242 aaKnown RBP7.75□□□□□ -1.17
CNOT4-201ENST00000315544 H0YHG0 523 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 LILRB5O75023 590 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 OR4F21O95013 312 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 FAM157BP0CG42 384 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 GPR15P49685 360 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 HLCSP50747 726 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 RAE1P78406 368 aaKnown RBP7.75□□□□□ -1.17
CNOT4-201ENST00000315544 CYLC2Q14093 348 aaPredicted RBP7.75□□□□□ -1.17
CNOT4-201ENST00000315544 TSNAXIP1Q2TAA8 658 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 PLA2G4EQ3MJ16 856 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 SEL1L3Q68CR1 1132 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 OR4F3Q6IEY1 312 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.75□□□□□ -1.173e-10■■■■■ 29.8
CNOT4-201ENST00000315544 SLC39A11Q8N1S5 342 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 GPATCH11Q8N954 259 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 OR4K2Q8NGD2 314 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 LKAAEAR1Q8TD35 194 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 NELL1Q92832 810 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 LRRC58Q96CX6 371 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms