RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 BUD23O43709 281 aaKnown RBP26.07■■□□□ 1.76
CDKN2A-201ENST00000304494 ZNF7P17097 686 aaPredicted RBP26.07■■□□□ 1.76
CDKN2A-201ENST00000304494 VCLP18206 1134 aa26.07■■□□□ 1.76
CDKN2A-201ENST00000304494 PARP6Q2NL67 630 aa26.07■■□□□ 1.76
CDKN2A-201ENST00000304494 KHDC1Q4VXA5 237 aaKnown RBP26.07■■□□□ 1.76
CDKN2A-201ENST00000304494 OR4D9Q8NGE8 314 aa26.07■■□□□ 1.76
CDKN2A-201ENST00000304494 TBL1YQ9BQ87 522 aa26.07■■□□□ 1.76
CDKN2A-201ENST00000304494 LDHAL6BQ9BYZ2 381 aaPredicted RBP26.07■■□□□ 1.76
CDKN2A-201ENST00000304494 ZFC3H1O60293 1989 aaKnown RBP26.06■■□□□ 1.76
CDKN2A-201ENST00000304494 HGSO14964 777 aaPredicted RBP26.06■■□□□ 1.76
CDKN2A-201ENST00000304494 CRTAMO95727 393 aa26.06■■□□□ 1.76
CDKN2A-201ENST00000304494 TRA2AQ13595 282 aaKnown RBP eCLIP26.06■■□□□ 1.76
CDKN2A-201ENST00000304494 PLA2G4EQ3MJ16 856 aa26.06■■□□□ 1.76
CDKN2A-201ENST00000304494 NKAIN2Q5VXU1 208 aa26.06■■□□□ 1.76
CDKN2A-201ENST00000304494 TRAPPC5Q8IUR0 188 aa26.06■■□□□ 1.76
CDKN2A-201ENST00000304494 ZNF547Q8IVP9 402 aa26.06■■□□□ 1.76
CDKN2A-201ENST00000304494 KLHDC8BQ8IXV7 354 aa26.06■■□□□ 1.76
CDKN2A-201ENST00000304494 DDHD1Q8NEL9 900 aa26.06■■□□□ 1.76
CDKN2A-201ENST00000304494 SLC35B2Q8TB61 432 aa26.06■■□□□ 1.76
CDKN2A-201ENST00000304494 ZMYND15Q9H091 742 aa26.06■■□□□ 1.76
CDKN2A-201ENST00000304494 ARNT2Q9HBZ2 717 aa26.06■■□□□ 1.76
CDKN2A-201ENST00000304494 PRDM8Q9NQV8 689 aa26.06■■□□□ 1.76
CDKN2A-201ENST00000304494 SMOXQ9NWM0 555 aa26.06■■□□□ 1.76
CDKN2A-201ENST00000304494 PISDQ9UG56 409 aa26.06■■□□□ 1.76
CDKN2A-201ENST00000304494 SLC23A2Q9UGH3 650 aa26.06■■□□□ 1.76
CDKN2A-201ENST00000304494 R3HDM2Q9Y2K5 976 aaKnown RBP26.06■■□□□ 1.76
CDKN2A-201ENST00000304494 BPTFQ12830 3046 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 FAM208BQ5VWN6 2430 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 IGHV5-10-1A0A0J9YXX1 117 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 DUX1O43812 170 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 UGT1A9O60656 530 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 HGFP14210 728 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 UGT1A6P19224 532 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 UGT1A1P22309 533 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 UGT1A4P22310 534 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 UGT1A3P35503 534 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 PPM1FP49593 454 aaPredicted RBP26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 LIMK2P53671 638 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 EPHA4P54764 986 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 UCNP55089 124 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 NFATC2Q13469 925 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 P3H1Q32P28 736 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 ZNF574Q6ZN55 896 aaPredicted RBP26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 JAMLQ86YT9 394 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 C19orf43Q9BQ61 176 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 TMEM121Q9BTD3 319 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 FRMD8P1Q9BZ68 369 aaPredicted RBP26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 UGT1A7Q9HAW7 530 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 UGT1A10Q9HAW8 530 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 UGT1A8Q9HAW9 530 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 CPNE7Q9UBL6 633 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 DNAJC16Q9Y2G8 782 aa26.05■■□□□ 1.76
CDKN2A-201ENST00000304494 TCRBV7S2A1N4TA0A589 114 aa26.04■■□□□ 1.76
CDKN2A-201ENST00000304494 GAPDHSO14556 408 aaPredicted RBP26.04■■□□□ 1.76
CDKN2A-201ENST00000304494 KLK10O43240 276 aa26.04■■□□□ 1.76
CDKN2A-201ENST00000304494 KCNJ13O60928 360 aa26.04■■□□□ 1.76
CDKN2A-201ENST00000304494 PRAMEF1O95521 474 aa26.04■■□□□ 1.76
CDKN2A-201ENST00000304494 CCDC175P0C221 793 aa26.04■■□□□ 1.76
CDKN2A-201ENST00000304494 OLIG2Q13516 323 aa26.04■■□□□ 1.76
CDKN2A-201ENST00000304494 TMEM71Q6P5X7 295 aa26.04■■□□□ 1.76
CDKN2A-201ENST00000304494 ZNF761Q86XN6 746 aaPredicted RBP26.04■■□□□ 1.76
CDKN2A-201ENST00000304494 OR4K2Q8NGD2 314 aa26.04■■□□□ 1.76
CDKN2A-201ENST00000304494 ZNF398Q8TD17 642 aa26.04■■□□□ 1.76
CDKN2A-201ENST00000304494 CRELD1Q96HD1 420 aa26.04■■□□□ 1.76
CDKN2A-201ENST00000304494 CCDC74BQ96LY2 380 aa26.04■■□□□ 1.76
CDKN2A-201ENST00000304494 ALS2CR12Q96Q35 445 aa26.04■■□□□ 1.76
CDKN2A-201ENST00000304494 PRORYQ9H606 182 aa26.04■■□□□ 1.76
CDKN2A-201ENST00000304494 UNC13CQ8NB66 2214 aa26.03■■□□□ 1.76
CDKN2A-201ENST00000304494 PDZK1P1A8MUH7 402 aa26.03■■□□□ 1.76
CDKN2A-201ENST00000304494 NVLO15381 856 aaKnown RBP26.03■■□□□ 1.76
CDKN2A-201ENST00000304494 HOXB3P14651 431 aaPredicted RBP26.03■■□□□ 1.76
CDKN2A-201ENST00000304494 IDSP22304 550 aa26.03■■□□□ 1.76
CDKN2A-201ENST00000304494 SLC5A2P31639 672 aa26.03■■□□□ 1.76
CDKN2A-201ENST00000304494 CSF2RBP32927 897 aa26.03■■□□□ 1.76
CDKN2A-201ENST00000304494 PTPRCAPQ14761 206 aa26.03■■□□□ 1.76
CDKN2A-201ENST00000304494 C16orf72Q14CZ0 275 aa26.03■■□□□ 1.76
CDKN2A-201ENST00000304494 GPRC6AQ5T6X5 926 aa26.03■■□□□ 1.76
CDKN2A-201ENST00000304494 DENND5AQ6IQ26 1287 aa26.03■■□□□ 1.76
CDKN2A-201ENST00000304494 ZNF662Q6ZS27 426 aa26.03■■□□□ 1.76
CDKN2A-201ENST00000304494 LRRC8AQ8IWT6 810 aa26.03■■□□□ 1.76
CDKN2A-201ENST00000304494 EPB41L1Q9H4G0 881 aa26.03■■□□□ 1.76
CDKN2A-201ENST00000304494 LRRC40Q9H9A6 602 aa26.03■■□□□ 1.76
CDKN2A-201ENST00000304494 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.03■■□□□ 1.76
CDKN2A-201ENST00000304494 ACSL6Q9UKU0 697 aa26.03■■□□□ 1.76
CDKN2A-201ENST00000304494 PRR19A6NJB7 356 aa26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 GPR39O43194 453 aa26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 PSMD3O43242 534 aa26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 NRDCO43847 1150 aa26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 METTL18O95568 372 aa26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 XRCC1P18887 633 aaPredicted RBP26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 ITIH1P19827 911 aa26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 STIP1P31948 543 aaKnown RBP26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 HADHAP40939 763 aa26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 GDF10P55107 478 aa26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 TMPRSS3P57727 454 aa26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 UBE2IP63279 158 aaKnown RBP26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 MSLNQ13421 630 aaPredicted RBP26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 SPARCL1Q14515 664 aa26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 RPS6KA1Q15418 735 aa26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 MEI1Q5TIA1 1274 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms