RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 VLDLRP98155 873 aa12.27□□□□□ -0.45
ABCA3-201ENST00000301732 ATXN7L3Q14CW9 347 aaPredicted RBP12.27□□□□□ -0.45
ABCA3-201ENST00000301732 LSM12Q3MHD2 195 aaKnown RBP12.27□□□□□ -0.45
ABCA3-201ENST00000301732 THAP5Q7Z6K1 395 aa12.27□□□□□ -0.45
ABCA3-201ENST00000301732 OR5AK3PQ8NH89 298 aa12.27□□□□□ -0.45
ABCA3-201ENST00000301732 ZNF69Q9UC07 566 aa12.27□□□□□ -0.45
ABCA3-201ENST00000301732 PRELID1Q9Y255 219 aa12.27□□□□□ -0.45
ABCA3-201ENST00000301732 KAT6AQ92794 2004 aa12.27□□□□□ -0.45
ABCA3-201ENST00000301732 M0R036 132 aa12.27□□□□□ -0.45
ABCA3-201ENST00000301732 FABP3P05413 133 aa12.27□□□□□ -0.45
ABCA3-201ENST00000301732 TGFBR2P37173 567 aa12.27□□□□□ -0.45
ABCA3-201ENST00000301732 PRKAA2P54646 552 aa12.27□□□□□ -0.45
ABCA3-201ENST00000301732 TRIM28Q13263 835 aaKnown RBP12.27□□□□□ -0.45
ABCA3-201ENST00000301732 LCN1P1Q5VSP4 162 aa12.27□□□□□ -0.45
ABCA3-201ENST00000301732 MSANTD1Q6ZTZ1 278 aa12.27□□□□□ -0.45
ABCA3-201ENST00000301732 ITIH5Q86UX2 942 aa12.27□□□□□ -0.45
ABCA3-201ENST00000301732 UNC5BQ8IZJ1 945 aa12.27□□□□□ -0.45
ABCA3-201ENST00000301732 CPSF7Q8N684 471 aaKnown RBP12.27□□□□□ -0.45
ABCA3-201ENST00000301732 GALNT11Q8NCW6 608 aa12.27□□□□□ -0.45
ABCA3-201ENST00000301732 GAL3ST4Q96RP7 486 aa12.27□□□□□ -0.45
ABCA3-201ENST00000301732 IL4I1Q96RQ9 567 aa12.27□□□□□ -0.45
ABCA3-201ENST00000301732 CADM1Q9BY67 442 aaKnown RBP12.27□□□□□ -0.45
ABCA3-201ENST00000301732 MRPL17Q9NRX2 175 aaKnown RBP12.27□□□□□ -0.45
ABCA3-201ENST00000301732 NKX1-2Q9UD57 310 aaPredicted RBP12.27□□□□□ -0.45
ABCA3-201ENST00000301732 NFASCO94856 1347 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 A0A1B0GV50 99 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 C2orf92A0A1B0GVN3 265 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 INPPL1O15357 1258 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 GAS2O43903 313 aaKnown RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 PLIN3O60664 434 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 PTPRAP18433 802 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 ASMTP46597 345 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 MLLT10P55197 1068 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 DSC2Q02487 901 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 INTS5Q6P9B9 1019 aaKnown RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 OAFQ86UD1 273 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 P2RY8Q86VZ1 359 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 OR5T3Q8NGG3 340 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 TUBGCP5Q96RT8 1024 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 TMED9Q9BVK6 235 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 OSBPL7Q9BZF2 842 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 ZYG11BQ9C0D3 744 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 EVLQ9UI08 416 aaPredicted RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 A0A1W2PQH9 124 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 ACKR2O00590 384 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 CAPN15O75808 1086 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 OR4F21O95013 312 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 ITGAVP06756 1048 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 ADRA2BP18089 450 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 CBX5P45973 191 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 CCR10P46092 362 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 C1orf186Q6ZWK4 172 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 CSGALNACT1Q8TDX6 532 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 HAS1Q92839 578 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 ELOVL4Q9GZR5 314 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 GBA2Q9HCG7 927 aaPredicted RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 AGO1Q9UL18 857 aaKnown RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 RPP14O95059 124 aaKnown RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 IDO1P14902 403 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 ITGA2P17301 1181 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 MAT2AP31153 395 aaKnown RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 CYP2C18P33260 490 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 RPS9P46781 194 aaKnown RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 CLCN5P51795 746 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 PGDP52209 483 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 SEC13P55735 322 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 OR2B6P58173 313 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 CREB5Q02930 508 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 MPP2Q14168 576 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 SLC9B1Q4ZJI4 515 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 CRELD2Q6UXH1 353 aaPredicted RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 ZNF398Q8TD17 642 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 FCRL2Q96LA5 508 aaPredicted RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 RRAGCQ9HB90 399 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 PLCL2Q9UPR0 1127 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 PLLPQ9Y342 182 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 LDB2O43679 373 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 AVPR1BP47901 424 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 ZMYND11Q15326 602 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 EIF2S3LQ2VIR3 472 aaKnown RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 SH3PXD2AQ5TCZ1 1133 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 ZNF248Q8NDW4 579 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 OR6K6Q8NGW6 343 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 ZC3H10Q96K80 434 aaKnown RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 HERC2P3Q9BVR0 1158 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 NXF3Q9H4D5 531 aaKnown RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 EIF2B4Q9UI10 523 aaKnown RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 PSME2Q9UL46 239 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 ARHGEF5Q12774 1597 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 GOLGA4Q13439 2230 aaKnown RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 IPO13O94829 963 aaKnown RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 EIF1AXP47813 144 aaKnown RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 RXRGP48443 463 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 RPS3AP61247 264 aaKnown RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 PDE12Q6L8Q7 609 aaKnown RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 TNFAIP8L2Q6P589 184 aaPredicted RBP12.26□□□□□ -0.45
ABCA3-201ENST00000301732 HMGN2P46Q86SG4 172 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 COPS8Q99627 209 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 ZNF350Q9GZX5 532 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms