RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 TACR2P21452 398 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CRHR1P34998 444 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PTPN9P43378 593 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 MINDY4Q4G0A6 757 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GCNT6Q5T4J0 391 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 AHSA2Q719I0 299 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PTCH2Q9Y6C5 1203 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PRAMEF1O95521 474 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 NUDT17P0C025 328 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 AZGP1P25311 298 aaKnown RBP13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ILF2Q12905 390 aaKnown RBP13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CHST4Q8NCG5 386 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RBM15BQ8NDT2 890 aaKnown RBP13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RNF31Q96EP0 1072 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SLC4A9Q96Q91 983 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 HSD17B14Q9BPX1 270 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PRDM16Q9HAZ2 1276 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SIRPGQ9P1W8 387 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 MALT1Q9UDY8 824 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 DHX15O43143 795 aaKnown RBP13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 C22orf31O95567 290 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CAPGP40121 348 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CCR10P46092 362 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RPL5P46777 297 aaKnown RBP13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 TEX44Q53QW1 395 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GALNT18Q6P9A2 607 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ULK3Q6PHR2 472 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FRRS1Q6ZNA5 592 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 LNX2Q8N448 690 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 TDRD1Q9BXT4 1180 aaKnown RBP13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RHOJQ9H4E5 214 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ETAA1Q9NY74 926 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 TNFRSF11BO00300 401 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FKTNO75072 461 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 MTRF1O75570 445 aaKnown RBP13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PGDP52209 483 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 TRAP1Q12931 704 aaKnown RBP13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 NEK5Q6P3R8 708 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PRSS55Q6UWB4 352 aaPredicted RBP13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SPATA19Q7Z5L4 167 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ZNF781Q8N8C0 355 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 OR2L5Q8NG80 312 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 AIF1LQ9BQI0 150 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GBA3Q9H227 469 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PDZD7Q9H5P4 517 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 DNAJC11Q9NVH1 559 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 EIF2B4Q9UI10 523 aaKnown RBP13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CLUHO75153 1309 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GSC2O15499 205 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 C4BPAP04003 597 aaKnown RBP13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 APODP05090 189 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 MYCLP1P12525 358 aaPredicted RBP13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 LMO2P25791 158 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GLUD2P49448 558 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 MMP14P50281 582 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PCBP2Q15366 365 aaKnown RBP eCLIP13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 DEFB115Q30KQ5 88 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SH3PXD2AQ5TCZ1 1133 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 MCFD2Q8NI22 146 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 LPGAT1Q92604 370 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CNPPD1Q9BV87 410 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GSDMCQ9BYG8 508 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 TOR3AQ9H497 397 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 MBD2Q9UBB5 411 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 MAGEL2Q9UJ55 1249 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FADS3Q9Y5Q0 445 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 A0A0G2JN53 185 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CDK14O94921 469 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 IFNGP01579 166 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FKBP1AP62942 108 aaKnown RBP13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CBFBQ13951 182 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RALGPS1Q5JS13 557 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ESRP1Q6NXG1 681 aaKnown RBP13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ABHD15Q6UXT9 468 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ZNF557Q8N988 423 aaPredicted RBP13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SLC44A1Q8WWI5 657 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CPT1BQ92523 772 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 AP3S1Q92572 193 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 BTN2A3PQ96KV6 586 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CITED4Q96RK1 184 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 TBX5Q99593 518 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 DISP2A7MBM2 1401 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 UGT1A9O60656 530 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PKMP14618 531 aaKnown RBP13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SPAM1P38567 509 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RPS6KA3P51812 740 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 IRF9Q00978 393 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 OGFOD2Q6N063 350 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CHST15Q7LFX5 561 aaPredicted RBP13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PQLC1Q8N2U9 271 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 EIF1ADQ8N9N8 165 aaKnown RBP13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SMPDL3BQ92485 455 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 KLHL32Q96NJ5 620 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GFM1Q96RP9 751 aaKnown RBP13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 UGT1A7Q9HAW7 530 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 UGT1A10Q9HAW8 530 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 UGT1A8Q9HAW9 530 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 KCTD5Q9NXV2 234 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 TBC1D24Q9ULP9 559 aa13.46□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ZNF536O15090 1300 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms