RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 POLG2Q9UHN1 485 aa13.34□□□□□ -0.27
CTDP1-202ENST00000299543 PCDHB5Q9Y5E4 795 aa13.34□□□□□ -0.27
CTDP1-202ENST00000299543 HTTP42858 3142 aa13.34□□□□□ -0.27
CTDP1-202ENST00000299543 CBX4O00257 560 aa13.34□□□□□ -0.27
CTDP1-202ENST00000299543 C8BP07358 591 aa13.34□□□□□ -0.27
CTDP1-202ENST00000299543 ITGB6P18564 788 aa13.34□□□□□ -0.27
CTDP1-202ENST00000299543 OXTRP30559 389 aa13.34□□□□□ -0.27
CTDP1-202ENST00000299543 ALDH3B2P48448 385 aa13.34□□□□□ -0.27
CTDP1-202ENST00000299543 INPP5AQ14642 412 aa13.34□□□□□ -0.27
CTDP1-202ENST00000299543 PHKG1Q16816 387 aa13.34□□□□□ -0.27
CTDP1-202ENST00000299543 ANKS6Q68DC2 871 aa13.34□□□□□ -0.27
CTDP1-202ENST00000299543 GLT6D1Q7Z4J2 308 aa13.34□□□□□ -0.27
CTDP1-202ENST00000299543 RALGPS2Q86X27 583 aaPredicted RBP13.34□□□□□ -0.27
CTDP1-202ENST00000299543 ZC3H7AQ8IWR0 971 aaKnown RBP13.34□□□□□ -0.27
CTDP1-202ENST00000299543 BTN2A3PQ96KV6 586 aa13.34□□□□□ -0.27
CTDP1-202ENST00000299543 CD274Q9NZQ7 290 aa13.34□□□□□ -0.27
CTDP1-202ENST00000299543 CD300AQ9UGN4 299 aa13.34□□□□□ -0.27
CTDP1-202ENST00000299543 MROH6A6NGR9 719 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 IQCF5A8MTL0 148 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 OR1I1O60431 355 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 ZNF623O75123 536 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 KATNA1O75449 491 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 RPP40O75818 363 aaKnown RBP13.33□□□□□ -0.28
CTDP1-202ENST00000299543 KCNK10P57789 538 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 RPL26P61254 145 aaKnown RBP13.33□□□□□ -0.28
CTDP1-202ENST00000299543 RPS24P62847 133 aaKnown RBP13.33□□□□□ -0.28
CTDP1-202ENST00000299543 ADRM1Q16186 407 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 VARS2Q5ST30 1063 aaKnown RBP13.33□□□□□ -0.28
CTDP1-202ENST00000299543 BORCS5Q969J3 196 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 TEX37Q96LM6 180 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 TCF12Q99081 682 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 HGH1Q9BTY7 390 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 MARCH7Q9H992 704 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 OLAHQ9NV23 265 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 TMEM248Q9NWD8 314 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 TAS2R13Q9NYV9 303 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 OAZ3Q9UMX2 235 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 ANKRD34BA5PLL1 514 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 CFAP99D6REC4 459 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 H3BMQ9 156 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 AGRPO00253 132 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 SNX2O60749 519 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 NIPSNAP2O75323 286 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 IRF1P10914 325 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 MTHFD2P13995 350 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 FASP25445 335 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 DUSP4Q13115 394 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 PLCL1Q15111 1095 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 UGT3A2Q3SY77 523 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 AFMIDQ63HM1 303 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 BORAQ6PGQ7 559 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 C16orf59Q7L2K0 433 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 LYSMD3Q7Z3D4 306 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 CCDC117Q8IWD4 279 aaPredicted RBP13.33□□□□□ -0.28
CTDP1-202ENST00000299543 CHERPQ8IWX8 916 aaKnown RBP13.33□□□□□ -0.28
CTDP1-202ENST00000299543 PDZD8Q8NEN9 1154 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 STAG3L4Q8TBR4 150 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 MAGEE2Q8TD90 523 aaPredicted RBP13.33□□□□□ -0.28
CTDP1-202ENST00000299543 LRRC58Q96CX6 371 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 C1orf74Q96LT6 269 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 COG8Q96MW5 612 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 RRAGCQ9HB90 399 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.33□□□□□ -0.28
CTDP1-202ENST00000299543 POLR3BQ9NW08 1133 aaPredicted RBP13.33□□□□□ -0.28
CTDP1-202ENST00000299543 CMTM6Q9NX76 183 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 HCSTQ9UBK5 93 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 IKZF3Q9UKT9 509 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 SCML2Q9UQR0 700 aa13.33□□□□□ -0.28
CTDP1-202ENST00000299543 TCRBV3S1A0A5B6 114 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 TLR5O60602 858 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 ECI2O75521 394 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 ESRRBO95718 433 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 PCNAP12004 261 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 MAGP20916 626 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 GSSP48637 474 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 TPTEP56180 551 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 UFM1P61960 85 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 RAD51Q06609 339 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 TRAP1Q12931 704 aaKnown RBP13.32□□□□□ -0.28
CTDP1-202ENST00000299543 SERINC3Q13530 473 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 NFE2Q16621 373 aaPredicted RBP13.32□□□□□ -0.28
CTDP1-202ENST00000299543 ZIK1Q3SY52 487 aaPredicted RBP13.32□□□□□ -0.28
CTDP1-202ENST00000299543 PPP2R2DQ66LE6 453 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 UGT3A1Q6NUS8 523 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 DHRS4L2Q6PKH6 230 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 TMEM126BQ8IUX1 230 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 FIBCD1Q8N539 461 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 SIDT2Q8NBJ9 832 aaKnown RBP13.32□□□□□ -0.28
CTDP1-202ENST00000299543 SLC39A13Q96H72 371 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 FEM1CQ96JP0 617 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 ZNF597Q96LX8 424 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 SLC2A11Q9BYW1 496 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 RPF2Q9H7B2 306 aaKnown RBP13.32□□□□□ -0.28
CTDP1-202ENST00000299543 PRDM5Q9NQX1 630 aaPredicted RBP13.32□□□□□ -0.28
CTDP1-202ENST00000299543 WARS2Q9UGM6 360 aaKnown RBP13.32□□□□□ -0.28
CTDP1-202ENST00000299543 GABRQQ9UN88 632 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 PRELID1Q9Y255 219 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 ITM2BQ9Y287 266 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 PCDHGA8Q9Y5G5 932 aa13.32□□□□□ -0.28
CTDP1-202ENST00000299543 FAM47E-STBD1D6RA91 191 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms