RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 CR2P20023 1033 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 EPHB3P54753 998 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 BCL2L1Q07817 233 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 PRKG2Q13237 762 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 C5orf22Q49AR2 442 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 CWF19L1Q69YN2 538 aaKnown RBP13.48□□□□□ -0.25
CDH8-201ENST00000299345 LYSMD3Q7Z3D4 306 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 SKA2Q8WVK7 121 aaPredicted RBP13.48□□□□□ -0.25
CDH8-201ENST00000299345 ULK4Q96C45 1275 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 DGCR14Q96DF8 476 aaKnown RBP13.48□□□□□ -0.25
CDH8-201ENST00000299345 LRCH3Q96II8 777 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 TRIM8Q9BZR9 551 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 ZMYM5Q9UJ78 669 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 ZNF711Q9Y462 761 aa13.48□□□□□ -0.25
CDH8-201ENST00000299345 C1orf232A0A0U1RR37 186 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 A0A1W2PP18 115 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 FAM149AA5PLN7 773 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 A8MX80 341 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 TBC1D4O60343 1298 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 ALPIP09923 528 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 ATP6V1B2P21281 511 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 POLR2JP52435 117 aaKnown RBP13.47□□□□□ -0.25
CDH8-201ENST00000299345 TGFBIQ15582 683 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 BLOC1S3Q6QNY0 202 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 RBM44Q6ZP01 1051 aaKnown RBP13.47□□□□□ -0.25
CDH8-201ENST00000299345 CAMK1DQ8IU85 385 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 MINDY1Q8N5J2 469 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 BCL7CQ8WUZ0 217 aaPredicted RBP13.47□□□□□ -0.25
CDH8-201ENST00000299345 ASIC4Q96FT7 647 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 MYO19Q96H55 970 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 C2orf49Q9BVC5 232 aaPredicted RBP13.47□□□□□ -0.25
CDH8-201ENST00000299345 MAP10Q9P2G4 905 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 PCTPQ9UKL6 214 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 TBC1D30Q9Y2I9 924 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 TCRBV3S1A0A5B6 114 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 AQP12BA6NM10 295 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 H3BNC9 293 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 SEC24AO95486 1093 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 CKMP06732 381 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 UFM1P61960 85 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 GK3PQ14409 553 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 C6orf10Q5SRN2 563 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 AP1ARQ63HQ0 302 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 CERS6Q6ZMG9 384 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 AQP12AQ8IXF9 295 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 BIRC8Q96P09 236 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 CIPCQ9C0C6 399 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 WWOXQ9NZC7 414 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 IKZF3Q9UKT9 509 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 PCDHB1Q9Y5F3 818 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 MIA3Q5JRA6 1907 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 A0A1B0GTL3 188 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 MYOCOSA0A1B0GUC4 107 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 GPR39O43194 453 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 OR6B1O95007 311 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 MATN4O95460 622 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 CAPN1P07384 714 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 ERVK-8P63133 956 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 ARF5P84085 180 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 ARHGEF6Q15052 776 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 SGO1Q5FBB7 561 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 MILR1Q7Z6M3 343 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 CD200R1Q8TD46 325 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 SLC45A3Q96JT2 553 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 CEP295NLQ96MC4 621 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 ALG2Q9H553 416 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 NUDT4Q9NZJ9 180 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 EVLQ9UI08 416 aaPredicted RBP13.47□□□□□ -0.25
CDH8-201ENST00000299345 CNOT11Q9UKZ1 510 aaKnown RBP13.47□□□□□ -0.25
CDH8-201ENST00000299345 BACE2Q9Y5Z0 518 aa13.47□□□□□ -0.25
CDH8-201ENST00000299345 PRAMEF1O95521 474 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 CSKP41240 450 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 CLCN4P51793 760 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 LIPEQ05469 1076 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 ADRM1Q16186 407 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 IMPG1Q17R60 797 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 RABL3Q5HYI8 236 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 NCEH1Q6PIU2 408 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 DNAJB7Q7Z6W7 309 aaPredicted RBP13.46□□□□□ -0.25
CDH8-201ENST00000299345 TSPAN14Q8NG11 270 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 HIPK3Q9H422 1215 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 ZFYVE1Q9HBF4 777 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 MYRFQ9Y2G1 1151 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 SEC24DO94855 1032 aaPredicted RBP13.46□□□□□ -0.25
CDH8-201ENST00000299345 URODP06132 367 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 SLC6A2P23975 617 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 SERPINA9Q86WD7 417 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 ARL14EPQ8N8R7 260 aaPredicted RBP13.46□□□□□ -0.25
CDH8-201ENST00000299345 PXYLP1Q8TE99 480 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 ZUFSPQ96AP4 578 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 RMND5BQ96G75 393 aaPredicted RBP13.46□□□□□ -0.25
CDH8-201ENST00000299345 SEPHS2Q99611 448 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 FEM1AQ9BSK4 669 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 TRIM54Q9BYV2 358 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 AIG1Q9NVV5 245 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 PLK2Q9NYY3 685 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 VPS51Q9UID3 782 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 SH3BP1Q9Y3L3 701 aa13.46□□□□□ -0.25
CDH8-201ENST00000299345 KANSL1LA0AUZ9 987 aa13.46□□□□□ -0.26
CDH8-201ENST00000299345 SLC2A4P14672 509 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms