RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 FKBPLQ9UIM3 349 aa13.2□□□□□ -0.3
TNFRSF21-201ENST00000296861 VPS26AO75436 327 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 G6PDP11413 515 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 AGXTP21549 392 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 MATN1P21941 496 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 CDH3P22223 829 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 GPX3P22352 226 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 BMXP51813 675 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 DAB2P98082 770 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 FSCN1Q16658 493 aaKnown RBP13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 RGS21Q2M5E4 152 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 KCTD13Q8WZ19 329 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 HPS1Q92902 700 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 HOPXQ9BPY8 73 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 ZYG11BQ9C0D3 744 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 POLR1EQ9GZS1 481 aaKnown RBP13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 RAD21L1Q9H4I0 556 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 RUBCNLQ9H714 662 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 RIC8BQ9NVN3 520 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 FAIMQ9NVQ4 179 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 KIF17Q9P2E2 1029 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 LEF1Q9UJU2 399 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 HTTP42858 3142 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 SMIM35A0A1B0GVV1 85 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 TARM1B6A8C7 271 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 HSMCR30P0CW71 290 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 IDO1P14902 403 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 VARSP26640 1264 aaKnown RBP13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 RPS24P62847 133 aaKnown RBP13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 LCP2Q13094 533 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 SELPLGQ14242 412 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 SEMA3AQ14563 771 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 GTDC1Q4AE62 458 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 FBXL22Q6P050 247 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 GPRIN3Q6ZVF9 776 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 SLC22A15Q8IZD6 547 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 PSMA8Q8TAA3 256 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 IGSF8Q969P0 613 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 ABHD8Q96I13 439 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 SACM1LQ9NTJ5 587 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 WWOXQ9NZC7 414 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 TRIM24O15164 1050 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 KCNQ1P51787 676 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 TXNL4AP83876 142 aaKnown RBP13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 RFTN1Q14699 578 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 INTS6LQ5JSJ4 861 aaKnown RBP13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 PIK3R6Q5UE93 754 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 OSCP1Q8WVF1 389 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 ANKRD60Q9BZ19 345 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 HIPK3Q9H422 1215 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 TUBB1Q9H4B7 451 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 MARCH7Q9H992 704 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 UTS2RQ9UKP6 389 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 TRIM17Q9Y577 477 aa13.19□□□□□ -0.3
TNFRSF21-201ENST00000296861 GON4LQ3T8J9 2241 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 TCRBV3S1A0A5B6 114 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 DFNA5O60443 496 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 NTRK1P04629 796 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 C8BP07358 591 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 PIM1P11309 404 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 MYCLP1P12525 358 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 CLK1P49759 484 aaKnown RBP13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 CRYBB1P53674 252 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 ZNF792Q3KQV3 632 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 FAM174BQ3ZCQ3 159 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 BROXQ5VW32 411 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 SLCO6A1Q86UG4 719 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 TICAM1Q8IUC6 712 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 TMEM126BQ8IUX1 230 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 ADGRG5Q8IZF4 528 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 ZCCHC7Q8N3Z6 543 aaKnown RBP13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 NPLQ9BXD5 320 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 NOL6Q9H6R4 1146 aaKnown RBP13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 SYTL2Q9HCH5 934 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 PHIPQ8WWQ0 1821 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 G3V2T6 193 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 NADKO95544 446 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 FADS2O95864 444 aaKnown RBP13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 THRBP10828 461 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 CD1DP15813 335 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 MC4RP32245 332 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 SCNN1AP37088 669 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 CTBSQ01459 385 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 TRAP1Q12931 704 aaKnown RBP13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 TAF10Q12962 218 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 BORAQ6PGQ7 559 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 USP50Q70EL3 339 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 DET1Q7L5Y6 550 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 SYVN1Q86TM6 617 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 DCP1BQ8IZD4 617 aaKnown RBP13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 OR2T12Q8NG77 320 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 CNIH3Q8TBE1 160 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 HM13Q8TCT9 377 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 SERPINB11Q96P15 392 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 SLC30A3Q99726 388 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 DPY30Q9C005 99 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 C6orf62Q9GZU0 229 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 TOR3AQ9H497 397 aa13.18□□□□□ -0.3
TNFRSF21-201ENST00000296861 LOC100506127A0A0U1RQW1 187 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms