RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 SEC13P55735 322 aa22.59■■□□□ 1.21
PTX3-201ENST00000295927 TSNQ15631 228 aaKnown RBP22.59■■□□□ 1.21
PTX3-201ENST00000295927 SPRED3Q2MJR0 410 aa22.59■■□□□ 1.21
PTX3-201ENST00000295927 ERN2Q76MJ5 926 aaKnown RBP22.59■■□□□ 1.21
PTX3-201ENST00000295927 PIWIL4Q7Z3Z4 852 aaKnown RBP22.59■■□□□ 1.21
PTX3-201ENST00000295927 LRRC37BQ96QE4 947 aa22.59■■□□□ 1.21
PTX3-201ENST00000295927 ATG2BQ96BY7 2078 aa22.59■■□□□ 1.21
PTX3-201ENST00000295927 NPEPPSL1A6NEC2 478 aa22.59■■□□□ 1.21
PTX3-201ENST00000295927 SPECC1L-ADORA2AF8WAN1 911 aa22.59■■□□□ 1.21
PTX3-201ENST00000295927 BTN3A1O00481 513 aa22.59■■□□□ 1.21
PTX3-201ENST00000295927 KERAO60938 352 aa22.59■■□□□ 1.21
PTX3-201ENST00000295927 TPBGLP0DKB5 382 aa22.59■■□□□ 1.21
PTX3-201ENST00000295927 CFAP157Q5JU67 520 aa22.59■■□□□ 1.21
PTX3-201ENST00000295927 LSMEM2Q8N112 164 aa22.59■■□□□ 1.21
PTX3-201ENST00000295927 GAS2L1Q99501 681 aaPredicted RBP22.59■■□□□ 1.21
PTX3-201ENST00000295927 SIKE1Q9BRV8 207 aa22.59■■□□□ 1.21
PTX3-201ENST00000295927 ZSCAN5AQ9BUG6 496 aa22.59■■□□□ 1.21
PTX3-201ENST00000295927 ILKAPQ9H0C8 392 aaPredicted RBP22.59■■□□□ 1.21
PTX3-201ENST00000295927 HEY2Q9UBP5 337 aa22.59■■□□□ 1.21
PTX3-201ENST00000295927 RNF112Q9ULX5 631 aa22.59■■□□□ 1.21
PTX3-201ENST00000295927 COLQQ9Y215 455 aaPredicted RBP22.59■■□□□ 1.21
PTX3-201ENST00000295927 UBXN8O00124 270 aa22.58■■□□□ 1.21
PTX3-201ENST00000295927 WNT9AO14904 365 aa22.58■■□□□ 1.21
PTX3-201ENST00000295927 UBOX5O94941 541 aa22.58■■□□□ 1.21
PTX3-201ENST00000295927 MTHFD2P13995 350 aa22.58■■□□□ 1.21
PTX3-201ENST00000295927 CTHP32929 405 aa22.58■■□□□ 1.21
PTX3-201ENST00000295927 TIE1P35590 1138 aa22.58■■□□□ 1.21
PTX3-201ENST00000295927 NFKB2Q00653 900 aa22.58■■□□□ 1.21
PTX3-201ENST00000295927 CCDC15Q0P6D6 951 aa22.58■■□□□ 1.21
PTX3-201ENST00000295927 SETDB1Q15047 1291 aa22.58■■□□□ 1.21
PTX3-201ENST00000295927 ZNF284Q2VY69 593 aa22.58■■□□□ 1.21
PTX3-201ENST00000295927 LACTB2Q53H82 288 aaPredicted RBP22.58■■□□□ 1.21
PTX3-201ENST00000295927 NRSN1Q8IZ57 195 aa22.58■■□□□ 1.21
PTX3-201ENST00000295927 PDLIM5Q96HC4 596 aaKnown RBP22.58■■□□□ 1.21
PTX3-201ENST00000295927 COQ10AQ96MF6 247 aa22.58■■□□□ 1.21
PTX3-201ENST00000295927 MYLK2Q9H1R3 596 aa22.58■■□□□ 1.21
PTX3-201ENST00000295927 RAP2CQ9Y3L5 183 aa22.58■■□□□ 1.21
PTX3-201ENST00000295927 FADS2P1A8MWK0 482 aa22.57■■□□□ 1.2
PTX3-201ENST00000295927 NPC1O15118 1278 aa22.57■■□□□ 1.2
PTX3-201ENST00000295927 IMPDH1P20839 514 aa22.57■■□□□ 1.2
PTX3-201ENST00000295927 MPSTP25325 297 aa22.57■■□□□ 1.2
PTX3-201ENST00000295927 P2RY2P41231 377 aa22.57■■□□□ 1.2
PTX3-201ENST00000295927 RGS19P49795 217 aa22.57■■□□□ 1.2
PTX3-201ENST00000295927 CAMK2GQ13555 558 aaPredicted RBP22.57■■□□□ 1.2
PTX3-201ENST00000295927 E2F5Q15329 346 aa22.57■■□□□ 1.2
PTX3-201ENST00000295927 FAM46CQ5VWP2 391 aa22.57■■□□□ 1.2
PTX3-201ENST00000295927 FUBP1Q96AE4 644 aaKnown RBP22.57■■□□□ 1.2
PTX3-201ENST00000295927 CNDP1Q96KN2 507 aa22.57■■□□□ 1.2
PTX3-201ENST00000295927 HDAC8Q9BY41 377 aa22.57■■□□□ 1.2
PTX3-201ENST00000295927 COQ6Q9Y2Z9 468 aa22.57■■□□□ 1.2
PTX3-201ENST00000295927 SERPINB5P36952 375 aa22.57■■□□□ 1.2
PTX3-201ENST00000295927 GALNTL6Q49A17 601 aa22.57■■□□□ 1.2
PTX3-201ENST00000295927 MTDHQ86UE4 582 aaKnown RBP22.57■■□□□ 1.2
PTX3-201ENST00000295927 ZBTB2Q8N680 514 aa22.57■■□□□ 1.2
PTX3-201ENST00000295927 AP2M1Q96CW1 435 aa22.57■■□□□ 1.2
PTX3-201ENST00000295927 DTD2Q96FN9 168 aa22.57■■□□□ 1.2
PTX3-201ENST00000295927 WWP1Q9H0M0 922 aa22.57■■□□□ 1.2
PTX3-201ENST00000295927 SPATS2LQ9NUQ6 558 aaKnown RBP22.57■■□□□ 1.2
PTX3-201ENST00000295927 EYSQ5T1H1 3165 aa22.56■■□□□ 1.2
PTX3-201ENST00000295927 NEMP1O14524 444 aa22.56■■□□□ 1.2
PTX3-201ENST00000295927 AKT1P31749 480 aa22.56■■□□□ 1.2
PTX3-201ENST00000295927 CNTN1Q12860 1018 aa22.56■■□□□ 1.2
PTX3-201ENST00000295927 TMEM52BQ4KMG9 183 aa22.56■■□□□ 1.2
PTX3-201ENST00000295927 MAVSQ7Z434 540 aa22.56■■□□□ 1.2
PTX3-201ENST00000295927 RAVER1Q8IY67 606 aaKnown RBP22.56■■□□□ 1.2
PTX3-201ENST00000295927 PTGR2Q8N8N7 351 aaPredicted RBP22.56■■□□□ 1.2
PTX3-201ENST00000295927 GBP7Q8N8V2 638 aaPredicted RBP22.56■■□□□ 1.2
PTX3-201ENST00000295927 AGR3Q8TD06 166 aa22.56■■□□□ 1.2
PTX3-201ENST00000295927 ERP27Q96DN0 273 aa22.56■■□□□ 1.2
PTX3-201ENST00000295927 L3HYPDHQ96EM0 354 aa22.56■■□□□ 1.2
PTX3-201ENST00000295927 SHCBP1LQ9BZQ2 653 aa22.56■■□□□ 1.2
PTX3-201ENST00000295927 RSPH9Q9H1X1 276 aaPredicted RBP22.56■■□□□ 1.2
PTX3-201ENST00000295927 MBD1Q9UIS9 605 aaPredicted RBP22.56■■□□□ 1.2
PTX3-201ENST00000295927 HAO1Q9UJM8 370 aa22.56■■□□□ 1.2
PTX3-201ENST00000295927 RRP15Q9Y3B9 282 aaKnown RBP22.56■■□□□ 1.2
PTX3-201ENST00000295927 SUPT3HB4E1H0 165 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 ZNF195O14628 629 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 MBTPS2O43462 519 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 MMP20O60882 483 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 MTX2O75431 263 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 SUPT3HO75486 399 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 OR56A5P0C7T3 313 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 ALOX15P16050 662 aaPredicted RBP22.55■■□□□ 1.2
PTX3-201ENST00000295927 SERPINB3P29508 390 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 SATB1Q01826 763 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 PRKAA1Q13131 559 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 PFKFB4Q16877 469 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 ZNF678Q5SXM1 525 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 DET1Q7L5Y6 550 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 CYP2U1Q7Z449 544 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 SKA1Q96BD8 255 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 DCUN1D1Q96GG9 259 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 PANX3Q96QZ0 392 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 EBF4Q9BQW3 602 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 KCNK12Q9HB15 430 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 TRPV5Q9NQA5 729 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 LATS2Q9NRM7 1088 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 LIMD1Q9UGP4 676 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 ZDHHC2Q9UIJ5 367 aa22.55■■□□□ 1.2
PTX3-201ENST00000295927 TSR3Q9UJK0 312 aaKnown RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms