RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 CCDC159P0C7I6 412 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 TCN1P20061 433 aaPredicted RBP6.11□□□□□ -1.43
VCAM1-201ENST00000294728 MAGEA11P43364 429 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 KCNC1P48547 511 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 ENTPD1P49961 510 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 GALK1P51570 392 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 ARSFP54793 590 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 PLOD1Q02809 727 aaPredicted RBP6.11□□□□□ -1.43
VCAM1-201ENST00000294728 LIPEQ05469 1076 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 SERINC3Q13530 473 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 ACOX1Q15067 660 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 PCBP2Q15366 365 aaKnown RBP eCLIP6.11□□□□□ -1.43
VCAM1-201ENST00000294728 SIRPB2Q5JXA9 342 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 GPR158Q5T848 1215 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 XAF1Q6GPH4 301 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 KCTD8Q6ZWB6 473 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 TRIM74Q86UV6 250 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 TRIM73Q86UV7 250 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 MON1AQ86VX9 555 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 ANKRD13BQ86YJ7 626 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 PTGR2Q8N8N7 351 aaPredicted RBP6.11□□□□□ -1.43
VCAM1-201ENST00000294728 GLB1L3Q8NCI6 653 aaPredicted RBP6.11□□□□□ -1.43
VCAM1-201ENST00000294728 NPLOC4Q8TAT6 608 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 S100ZQ8WXG8 99 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 FAM122AQ96E09 287 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 SUSD3Q96L08 255 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 ZNF347Q96SE7 839 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 SLC30A3Q99726 388 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 KCTD14Q9BQ13 255 aaPredicted RBP6.11□□□□□ -1.43
VCAM1-201ENST00000294728 UGT2B28Q9BY64 529 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 NTN4Q9HB63 628 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 FAM105AQ9NUU6 356 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 UBP1Q9NZI7 540 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 ZNF711Q9Y462 761 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 HS3ST4Q9Y661 456 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 RNF103-CHMP3A0A140T963 221 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 C17orf102A2RUQ5 167 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 PFDN6O15212 129 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 SOAT2O75908 522 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 CLPXO76031 633 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 GNAO1P09471 354 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 ALOX5P09917 674 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 ITGAMP11215 1152 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 GGT1P19440 569 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 CRHBPP24387 322 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 POLR2JP52435 117 aaKnown RBP6.11□□□□□ -1.43
VCAM1-201ENST00000294728 C21orf59P57076 290 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 RPS3AP61247 264 aaKnown RBP6.11□□□□□ -1.43
VCAM1-201ENST00000294728 TRIM60Q495X7 471 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 ZNF789Q5FWF6 425 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 CDKL4Q5MAI5 379 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 AFTPHQ6ULP2 937 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 CD300LGQ6UXG3 332 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 DLEU7Q6UYE1 221 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 CYP2R1Q6VVX0 501 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 MSANTD1Q6ZTZ1 278 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 THAP5Q7Z6K1 395 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 SCD5Q86SK9 330 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 SPPL2CQ8IUH8 684 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 PLPP6Q8IY26 295 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 THEM5Q8N1Q8 247 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 MUL1Q969V5 352 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 FKBP10Q96AY3 582 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 THAP11Q96EK4 314 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 MOCOSQ96EN8 888 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 CELF6Q96J87 481 aaKnown RBP6.11□□□□□ -1.43
VCAM1-201ENST00000294728 SH3GL1Q99961 368 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 WDR12Q9GZL7 423 aaKnown RBP6.11□□□□□ -1.43
VCAM1-201ENST00000294728 MUC3BQ9H195 1237 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 FBXO44Q9H4M3 255 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 ALG9Q9H6U8 611 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 PDFQ9HBH1 243 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 GOLGA2P5Q9HBQ8 144 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 MID1IP1Q9NPA3 183 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 FBXO8Q9NRD0 319 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 SMPD4Q9NXE4 827 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 TAS2R13Q9NYV9 303 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 IFT80Q9P2H3 777 aaPredicted RBP6.11□□□□□ -1.43
VCAM1-201ENST00000294728 DNAJB9Q9UBS3 223 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 PCTPQ9UKL6 214 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 TRPV2Q9Y5S1 764 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 CROCCQ5TZA2 2017 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 CUL9Q8IWT3 2517 aa6.11□□□□□ -1.43
VCAM1-201ENST00000294728 SYNJ2BP-COX16A0A087WUM0 186 aa6.1□□□□□ -1.43
VCAM1-201ENST00000294728 MYOCOSA0A1B0GUC4 107 aa6.1□□□□□ -1.43
VCAM1-201ENST00000294728 SERTM1A2A2V5 107 aa6.1□□□□□ -1.43
VCAM1-201ENST00000294728 CCDC154A6NI56 674 aa6.1□□□□□ -1.43
VCAM1-201ENST00000294728 NR5A2O00482 541 aa6.1□□□□□ -1.43
VCAM1-201ENST00000294728 EI24O14681 340 aa6.1□□□□□ -1.43
VCAM1-201ENST00000294728 AURKAO14965 403 aa6.1□□□□□ -1.43
VCAM1-201ENST00000294728 ANKRD28O15084 1053 aa6.1□□□□□ -1.43
VCAM1-201ENST00000294728 PMPCBO75439 489 aa6.1□□□□□ -1.43
VCAM1-201ENST00000294728 WDR47O94967 919 aa6.1□□□□□ -1.43
VCAM1-201ENST00000294728 HGFP14210 728 aa6.1□□□□□ -1.43
VCAM1-201ENST00000294728 JUNDP17535 347 aa6.1□□□□□ -1.43
VCAM1-201ENST00000294728 HRH2P25021 359 aa6.1□□□□□ -1.43
VCAM1-201ENST00000294728 NRIP1P48552 1158 aa6.1□□□□□ -1.43
VCAM1-201ENST00000294728 KPNA1P52294 538 aaPredicted RBP6.1□□□□□ -1.43
VCAM1-201ENST00000294728 ZNF140P52738 457 aaPredicted RBP6.1□□□□□ -1.43
VCAM1-201ENST00000294728 PRAMEP78395 509 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms