RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 CHN2P52757 468 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 LAPTM5Q13571 262 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 ARMC3Q5W041 872 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 TRABD2AQ86V40 505 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 KCNN2Q9H2S1 579 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 NECTIN3Q9NQS3 549 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 CLDND1Q9NY35 253 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 IDH3BO43837 385 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 MSX2P35548 267 aaPredicted RBP17.16■□□□□ 0.34
SHANK1-201ENST00000293441 RALGPS2Q86X27 583 aaPredicted RBP17.16■□□□□ 0.34
SHANK1-201ENST00000293441 NUDT4Q9NZJ9 180 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 PHLPP1O60346 1717 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 OR5F1O95221 314 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 CHRNGP07510 517 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 ANPEPP15144 967 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 ATXN1P54253 815 aaKnown RBP17.15■□□□□ 0.34
SHANK1-201ENST00000293441 CLEC6AQ6EIG7 209 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 ECHDC2Q86YB7 292 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 MREGQ8N565 214 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 OR7A2PQ8NGA2 310 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 RBPJLQ9UBG7 517 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 MFHAS1Q9Y4C4 1052 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 TCRBV7S2A1N4TA0A589 114 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 NRP1O14786 923 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 LIN7AO14910 233 aaPredicted RBP17.15■□□□□ 0.34
SHANK1-201ENST00000293441 KRT36O76013 467 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 CSKP41240 450 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 MAPK12P53778 367 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 COL9A3Q14050 684 aaPredicted RBP17.15■□□□□ 0.34
SHANK1-201ENST00000293441 MAF1Q9H063 256 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 DBTP11182 482 aaKnown RBP17.15■□□□□ 0.34
SHANK1-201ENST00000293441 TIGD5Q53EQ6 642 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 PYDC2Q56P42 97 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 UNC5BQ8IZJ1 945 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 PIH1D2Q8WWB5 315 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 EBPLQ9BY08 206 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 SAGP10523 405 aaPredicted RBP17.15■□□□□ 0.34
SHANK1-201ENST00000293441 ALPPL2P10696 532 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 TAB1Q15750 504 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 OR2T12Q8NG77 320 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 PPM1MQ96MI6 270 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 GAL3ST4Q96RP7 486 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 SRMSQ9H3Y6 488 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 FKBPLQ9UIM3 349 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 PLLPQ9Y342 182 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 AP1S1P61966 158 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 MED22Q15528 200 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 C2orf27AQ580R0 203 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 ESRP1Q6NXG1 681 aaKnown RBP17.15■□□□□ 0.34
SHANK1-201ENST00000293441 RTL4Q6ZR62 310 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 OAFQ86UD1 273 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 PRSS58Q8IYP2 241 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 MFSD3Q96ES6 412 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 TRMOQ9BU70 441 aa17.15■□□□□ 0.34
SHANK1-201ENST00000293441 TM7SF2O76062 418 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 IL10RBQ08334 325 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 GALNT5Q7Z7M9 940 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 SH3RF2Q8TEC5 729 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 KLHL31Q9H511 634 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 NRP2O60462 931 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 SLC35G6P0C7Q6 338 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 FBXO15Q8NCQ5 510 aaPredicted RBP17.14■□□□□ 0.33
SHANK1-201ENST00000293441 CPT1BQ92523 772 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 NOL4O94818 638 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 ANXA4P09525 319 aaPredicted RBP17.14■□□□□ 0.33
SHANK1-201ENST00000293441 ASMTP46597 345 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 CXXC5Q7LFL8 322 aaKnown RBP17.14■□□□□ 0.33
SHANK1-201ENST00000293441 FNIP1Q8TF40 1166 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 POLR3BQ9NW08 1133 aaPredicted RBP17.14■□□□□ 0.33
SHANK1-201ENST00000293441 PRR5-ARHGAP8B1AHC4 643 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 SNAP91O60641 907 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 CCND3P30281 292 aaPredicted RBP17.14■□□□□ 0.33
SHANK1-201ENST00000293441 ARHGAP8P85298 464 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 LARS2Q15031 903 aaKnown RBP17.14■□□□□ 0.33
SHANK1-201ENST00000293441 RNPEPL1Q9HAU8 725 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 APOBEC3GQ9HC16 384 aaKnown RBP17.14■□□□□ 0.33
SHANK1-201ENST00000293441 SAMD4AQ9UPU9 718 aaKnown RBP17.14■□□□□ 0.33
SHANK1-201ENST00000293441 REXO2Q9Y3B8 237 aaKnown RBP17.14■□□□□ 0.33
SHANK1-201ENST00000293441 ARVCFO00192 962 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 IL12RB1P42701 662 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 KIR3DL1P43629 444 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 SLC20A2Q08357 652 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 FAM91A1Q658Y4 838 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 PEX5LQ8IYB4 626 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 RASGEF1CQ8N431 466 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 ZDHHC4Q9NPG8 344 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 EFR3BQ9Y2G0 817 aa17.14■□□□□ 0.33
SHANK1-201ENST00000293441 STAT5AP42229 794 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 HSPB3Q12988 150 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 GCNT6Q5T4J0 391 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 KRT74Q7RTS7 529 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 SRFBP1Q8NEF9 429 aaKnown RBP17.13■□□□□ 0.33
SHANK1-201ENST00000293441 TSPAN14Q8NG11 270 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 LRMDAQ9H2I8 198 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 TMEM27Q9HBJ8 222 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 MAGEL2Q9UJ55 1249 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 ARL5AQ9Y689 179 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 YJEFN3A6XGL0 299 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 BBIP1A8MTZ0 92 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 KCNJ2P63252 427 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms