RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 TRAFD1O14545 582 aaPredicted RBP11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 PRNPP04156 253 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 CYP4B1P13584 511 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 KELP23276 732 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 ASPAP45381 313 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 CDK9P50750 372 aaKnown RBP11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 MOGSQ13724 837 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 C5orf22Q49AR2 442 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 CASP12Q6UXS9 341 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 SLC26A9Q7LBE3 791 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 CRYGNQ8WXF5 182 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 MYDGFQ969H8 173 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 HGH1Q9BTY7 390 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 PRKD2Q9BZL6 878 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 CLCA2Q9UQC9 943 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 MTMR11A4FU01 709 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 LRRC72A6NJI9 287 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 FBP2O00757 339 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 GUCA1CO95843 209 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 HGFP14210 728 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 ABL2P42684 1182 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 ACADVLP49748 655 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 BCAP31P51572 246 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 PARP15Q460N3 678 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 FAM26DQ5JW98 314 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 DDI2Q5TDH0 399 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 B3GNT5Q9BYG0 378 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 IRF2BPLQ9H1B7 796 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 OSGEPL1Q9H4B0 414 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 C12orf4Q9NQ89 552 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 IRAK2O43187 625 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 VPS4BO75351 444 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 EPHX1P07099 455 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 PTPN20Q4JDL3 420 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 CCNYL2Q5T2Q4 361 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 RTL10Q7L3V2 364 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 RD3Q7Z3Z2 195 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 P2RY8Q86VZ1 359 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 SLC41A1Q8IVJ1 513 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 TSTD1Q8NFU3 115 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 CPT1BQ92523 772 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 ZNF670Q9BS34 389 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 POLE3Q9NRF9 147 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 DNAJC28Q9NX36 388 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 ERVW-1Q9UQF0 538 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 A0A1W2PPW3 197 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 PRKD3O94806 890 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 GLP2RO95838 553 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 MYL12AP19105 171 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 PSMB4P28070 264 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 NIPAL1Q6NVV3 410 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 ZNF544Q6NX49 715 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 C12orf50Q8NA57 414 aaPredicted RBP11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 FNDC8Q8TC99 324 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 SERAC1Q96JX3 654 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 KREMEN1Q96MU8 473 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 ALG9Q9H6U8 611 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 TDP1Q9NUW8 608 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 TMEM59LQ9UK28 342 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 AZGP1P25311 298 aaKnown RBP11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 PTPN3P26045 913 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 ADSLP30566 484 aaPredicted RBP11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 DAOAP59103 153 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 PPP4R4Q6NUP7 873 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 IKBIPQ70UQ0 350 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 C12orf43Q96C57 262 aaKnown RBP11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 NODALQ96S42 347 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 LPIN3Q9BQK8 851 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 SNRNP25Q9BV90 132 aaKnown RBP11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 TPK1Q9H3S4 243 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 ELOVL6Q9H5J4 265 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 IKZF3Q9UKT9 509 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 GSTK1Q9Y2Q3 226 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 COQ4Q9Y3A0 265 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 PCDHGA10Q9Y5H3 936 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 U3KQV3 271 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 SCN4AP35499 1836 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 A0A0A0MRY4 1105 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 FAM240BA0A1B0GVZ2 78 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 PIRO00625 290 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 RPN2P04844 631 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 MAPK1P28482 360 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 RFX4Q33E94 735 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 SLC9A4Q6AI14 798 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 FRMD7Q6ZUT3 714 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 SPATA6LQ8N4H0 392 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 AHCYL2Q96HN2 611 aaKnown RBP11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 SPATA13Q96N96 652 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 SEMA4BQ9NPR2 832 aaPredicted RBP11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 STOML2Q9UJZ1 356 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 COL11A2P13942 1736 aaPredicted RBP11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 FAM220BPB1ANY3 271 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 MAN2B1O00754 1011 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 C1RP00736 705 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 NUMBP49757 651 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 YBEYP58557 167 aaPredicted RBP11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 ELP6Q0PNE2 266 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 EOGTQ5NDL2 527 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 CACTIN-AS1Q8N1I8 211 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms