RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 GFAPP14136 432 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 TCF3P15923 654 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 AKT1P31749 480 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 SPINT3P49223 89 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 FCHO2Q0JRZ9 810 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 DMC1Q14565 340 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 RALGPS1Q5JS13 557 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 SNX20Q7Z614 316 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 SKA2Q8WVK7 121 aaPredicted RBP10.87□□□□□ -0.67
GGPS1-201ENST00000282841 FOXJ1Q92949 421 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 ZNF641Q96N77 438 aaPredicted RBP10.87□□□□□ -0.67
GGPS1-201ENST00000282841 TRMT61BQ9BVS5 477 aaKnown RBP10.87□□□□□ -0.67
GGPS1-201ENST00000282841 MTCH2Q9Y6C9 303 aa10.87□□□□□ -0.67
GGPS1-201ENST00000282841 UBFD1O14562 309 aaKnown RBP10.86□□□□□ -0.67
GGPS1-201ENST00000282841 VPS26AO75436 327 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 TSPAN12O95859 305 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 ACRV1P26436 265 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 GALK1P51570 392 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 KCNJ2P63252 427 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 ACAP2Q15057 778 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 SKIV2LQ15477 1246 aaKnown RBP10.86□□□□□ -0.67
GGPS1-201ENST00000282841 ZNF805Q5CZA5 627 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 SH2D4BQ5SQS7 431 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 TMEM198Q66K66 360 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 MBOAT1Q6ZNC8 495 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 CLNKQ7Z7G1 428 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 METTL3Q86U44 580 aaKnown RBP10.86□□□□□ -0.67
GGPS1-201ENST00000282841 PHTF2Q8N3S3 785 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 SPDYE1Q8NFV5 336 aaPredicted RBP10.86□□□□□ -0.67
GGPS1-201ENST00000282841 OR6Y1Q8NGX8 325 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 C17orf50Q8WW18 174 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 EZH1Q92800 747 aaPredicted RBP10.86□□□□□ -0.67
GGPS1-201ENST00000282841 KLK6Q92876 244 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 OR52B2Q96RD2 323 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 MCCC1Q96RQ3 725 aaPredicted RBP10.86□□□□□ -0.67
GGPS1-201ENST00000282841 TUBGCP5Q96RT8 1024 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 FAM129BQ96TA1 746 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 P2RY12Q9H244 342 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 ARL8BQ9NVJ2 186 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 RIMKLBQ9ULI2 386 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 RNF112Q9ULX5 631 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 SLC27A6Q9Y2P4 619 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 ATP6AP2A0A1C7CYW4 349 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 FADS2P1A8MWK0 482 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 UPK3BL1B0FP48 263 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 UPK3BL2E5RIL1 263 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 H7C0S8 307 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 FCHO1O14526 889 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 ECI2O75521 394 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 ATP6AP2O75787 350 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 T-ENOLP0DO92 83 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 COL6A2P12110 1019 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 MTHFD2P13995 350 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 NCF2P19878 526 aaPredicted RBP10.86□□□□□ -0.67
GGPS1-201ENST00000282841 PTGER3P43115 390 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 IDH3AP50213 366 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 CLCN7P51798 805 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 HK3P52790 923 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 RPL26P61254 145 aaKnown RBP10.86□□□□□ -0.67
GGPS1-201ENST00000282841 HNRNPA1L2Q32P51 320 aaKnown RBP10.86□□□□□ -0.67
GGPS1-201ENST00000282841 ACSBG2Q5FVE4 666 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 FBXL19Q6PCT2 694 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 LMNTD2Q8IXW0 634 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 NXPE1Q8N323 547 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 LILRA3Q8N6C8 439 aaPredicted RBP10.86□□□□□ -0.67
GGPS1-201ENST00000282841 FBXO27Q8NI29 283 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 KCNA7Q96RP8 456 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 RPL26L1Q9UNX3 145 aaKnown RBP10.86□□□□□ -0.67
GGPS1-201ENST00000282841 COMMD10Q9Y6G5 202 aa10.86□□□□□ -0.67
GGPS1-201ENST00000282841 TMEM202A6NGA9 273 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 SOBPA7XYQ1 873 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 SPINT1O43278 529 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 IPO13O94829 963 aaKnown RBP10.85□□□□□ -0.67
GGPS1-201ENST00000282841 POU2F2P09086 479 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 ELFN1P0C7U0 828 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 ATP5F1P24539 256 aaPredicted RBP10.85□□□□□ -0.67
GGPS1-201ENST00000282841 GRK2P25098 689 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 HSPA14Q0VDF9 509 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 RALGDSQ12967 914 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 TSNAXIP1Q2TAA8 658 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 TMEM31Q5JXX7 168 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 TMEM184AQ6ZMB5 413 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 TREML1Q86YW5 311 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 CPA6Q8N4T0 437 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 POU5F2Q8N7G0 328 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 SUSD6Q92537 303 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 LRCH3Q96II8 777 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 SEMA4BQ9NPR2 832 aaPredicted RBP10.85□□□□□ -0.67
GGPS1-201ENST00000282841 HEBP1Q9NRV9 189 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 GIMAP2Q9UG22 337 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 SERGEFQ9UGK8 458 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 LIMD1Q9UGP4 676 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 ZMYM5Q9UJ78 669 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 APPL1Q9UKG1 709 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 ADAMTS6Q9UKP5 1117 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 ZNF195O14628 629 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 ENO1P06733 434 aaKnown RBP10.85□□□□□ -0.67
GGPS1-201ENST00000282841 ERFP50548 548 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 NCALDP61601 193 aa10.85□□□□□ -0.67
GGPS1-201ENST00000282841 POLR2LP62875 67 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms