RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 SNRPB2P08579 225 aaKnown RBP9.71□□□□□ -0.86
LRTM1-201ENST00000273286 CCDC172P0C7W6 258 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 MYF5P13349 255 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 GKP32189 559 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 CCKBRP32239 447 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 RFC1P35251 1148 aaPredicted RBP9.71□□□□□ -0.86
LRTM1-201ENST00000273286 POLR2FP61218 127 aaKnown RBP9.71□□□□□ -0.86
LRTM1-201ENST00000273286 POLR2LP62875 67 aaKnown RBP9.71□□□□□ -0.86
LRTM1-201ENST00000273286 RPL11P62913 178 aaKnown RBP9.71□□□□□ -0.86
LRTM1-201ENST00000273286 MTM1Q13496 603 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 SERINC3Q13530 473 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 NFATC4Q14934 902 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 UGP2Q16851 508 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 HSP90AA4PQ58FG1 418 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 TPRG1LQ5T0D9 272 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 ATXN7L2Q5T6C5 722 aaPredicted RBP9.71□□□□□ -0.86
LRTM1-201ENST00000273286 FAM72AQ5TYM5 149 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 FAM72DQ6L9T8 149 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 PCSK4Q6UW60 755 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 FAM72BQ86X60 149 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 CCDC185Q8N715 623 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 JOSD2Q8TAC2 188 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 SEC14L1Q92503 715 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 MED8Q96G25 268 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 PRR11Q96HE9 360 aaPredicted RBP9.71□□□□□ -0.86
LRTM1-201ENST00000273286 GBP4Q96PP9 640 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 CCNL2Q96S94 520 aaPredicted RBP9.71□□□□□ -0.86
LRTM1-201ENST00000273286 GORASP1Q9BQQ3 440 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 GANQ9H2C0 597 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 FAM207AQ9NSI2 230 aaPredicted RBP9.71□□□□□ -0.86
LRTM1-201ENST00000273286 SAMSN1Q9NSI8 373 aaKnown RBP9.71□□□□□ -0.86
LRTM1-201ENST00000273286 KCTD5Q9NXV2 234 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 ACTL7AQ9Y615 435 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 DGKBQ9Y6T7 804 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 ATMQ13315 3056 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 RASA4BC9J798 803 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 D6RAR5 112 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 RASA4O43374 803 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 TNFSF15O95150 251 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 NFKBIAP25963 317 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 SERPINA4P29622 427 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 ECI1P42126 302 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 CSNK1DP48730 415 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 NDST2P52849 883 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 INHBCP55103 352 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 JAM2P57087 298 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 PTP4A2Q12974 167 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 C1orf61Q13536 156 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 IRF4Q15306 451 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 ZFYVE27Q5T4F4 411 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 E4F1Q66K89 784 aaPredicted RBP9.7□□□□□ -0.86
LRTM1-201ENST00000273286 WDR59Q6PJI9 974 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 PCDH19Q8TAB3 1148 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 SLC30A5Q8TAD4 765 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 SLC20A1Q8WUM9 679 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 DIO2Q92813 273 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 VOPP1Q96AW1 172 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 HMCESQ96FZ2 354 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 WDR92Q96MX6 357 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 RBM15Q96T37 977 aaKnown RBP eCLIP9.7□□□□□ -0.86
LRTM1-201ENST00000273286 CNPY3Q9BT09 278 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 WRAP53Q9BUR4 548 aaKnown RBP9.7□□□□□ -0.86
LRTM1-201ENST00000273286 B3GNT4Q9C0J1 378 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 CLPBQ9H078 707 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 TCEAL2Q9H3H9 227 aaPredicted RBP9.7□□□□□ -0.86
LRTM1-201ENST00000273286 ATP13A3Q9H7F0 1226 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 MBNL1Q9NR56 388 aaKnown RBP9.7□□□□□ -0.86
LRTM1-201ENST00000273286 SEPT10Q9P0V9 454 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 UBA2Q9UBT2 640 aaPredicted RBP9.7□□□□□ -0.86
LRTM1-201ENST00000273286 KLQ9UEF7 1012 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 SPTA1P02549 2419 aa9.7□□□□□ -0.86
LRTM1-201ENST00000273286 COL27A1Q8IZC6 1860 aaPredicted RBP9.69□□□□□ -0.86
LRTM1-201ENST00000273286 A0A1W2PQ67 120 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 ARHGAP42A6NI28 874 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 GOLGA6L22H0YM25 854 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 CACNB4O00305 520 aaPredicted RBP9.69□□□□□ -0.86
LRTM1-201ENST00000273286 CREB3O43889 395 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 NOBOXO60393 691 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 GJB6O95452 261 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 TNFP01375 233 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 HOXC4P09017 264 aaPredicted RBP9.69□□□□□ -0.86
LRTM1-201ENST00000273286 SFTPCP11686 197 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 CHRNB2P17787 502 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 MMP12P39900 470 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 ZNF135P52742 658 aaPredicted RBP9.69□□□□□ -0.86
LRTM1-201ENST00000273286 PDX1P52945 283 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 KIAA1024LP59773 190 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 KRTAP10-2P60368 255 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 SRP54P61011 504 aaKnown RBP9.69□□□□□ -0.86
LRTM1-201ENST00000273286 PEX6Q13608 980 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 RFTN1Q14699 578 aaPredicted RBP9.69□□□□□ -0.86
LRTM1-201ENST00000273286 CLPPQ16740 277 aaPredicted RBP9.69□□□□□ -0.86
LRTM1-201ENST00000273286 ALG11Q2TAA5 492 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 WSCD2Q2TBF2 565 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 DNAJC24Q6P3W2 148 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 SCYL2Q6P3W7 929 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 DCUN1D2Q6PH85 259 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 CRTC1Q6UUV9 634 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 ENPP7Q6UWV6 458 aa9.69□□□□□ -0.86
LRTM1-201ENST00000273286 LEKR1Q6ZMV7 388 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms