RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 ADGRG6Q86SQ4 1221 aa15.16■□□□□ 0.02
SF3B4-201ENST00000271628 TSPAN33Q86UF1 283 aa15.16■□□□□ 0.02
SF3B4-201ENST00000271628 SPNS2Q8IVW8 549 aa15.16■□□□□ 0.02
SF3B4-201ENST00000271628 FBXO39Q8N4B4 442 aa15.16■□□□□ 0.02
SF3B4-201ENST00000271628 C12orf76Q8N812 135 aaPredicted RBP15.16■□□□□ 0.02
SF3B4-201ENST00000271628 BPIFB1Q8TDL5 484 aa15.16■□□□□ 0.02
SF3B4-201ENST00000271628 FRS2Q8WU20 508 aa15.16■□□□□ 0.02
SF3B4-201ENST00000271628 EEF1AKMT1Q8WVE0 214 aa15.16■□□□□ 0.02
SF3B4-201ENST00000271628 EXT2Q93063 718 aa15.16■□□□□ 0.02
SF3B4-201ENST00000271628 KLHL32Q96NJ5 620 aa15.16■□□□□ 0.02
SF3B4-201ENST00000271628 LRRC3BQ96PB8 259 aa15.16■□□□□ 0.02
SF3B4-201ENST00000271628 CDCA3Q99618 268 aaPredicted RBP15.16■□□□□ 0.02
SF3B4-201ENST00000271628 WDR55Q9H6Y2 383 aaPredicted RBP15.16■□□□□ 0.02
SF3B4-201ENST00000271628 GALPQ9UBC7 116 aa15.16■□□□□ 0.02
SF3B4-201ENST00000271628 SCOCQ9UIL1 159 aa15.16■□□□□ 0.02
SF3B4-201ENST00000271628 SLC27A6Q9Y2P4 619 aa15.16■□□□□ 0.02
SF3B4-201ENST00000271628 A8MX80 341 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 NEMP1O14524 444 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 GPR39O43194 453 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 NFATC1O95644 943 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 TSPAN12O95859 305 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 CISD3P0C7P0 127 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 ZNF30P17039 623 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 TSNQ15631 228 aaKnown RBP15.15■□□□□ 0.02
SF3B4-201ENST00000271628 PDCD2Q16342 344 aaPredicted RBP15.15■□□□□ 0.02
SF3B4-201ENST00000271628 CHST14Q8NCH0 376 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 FUBP1Q96AE4 644 aaKnown RBP15.15■□□□□ 0.02
SF3B4-201ENST00000271628 LINGO1Q96FE5 620 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 CLPTM1LQ96KA5 538 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 MRGPRX3Q96LB0 322 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 SLC30A3Q99726 388 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 CIPCQ9C0C6 399 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 CERS4Q9HA82 394 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 SARS2Q9NP81 518 aaKnown RBP15.15■□□□□ 0.02
SF3B4-201ENST00000271628 NDE1Q9NXR1 346 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 YBX2Q9Y2T7 364 aaKnown RBP15.15■□□□□ 0.02
SF3B4-201ENST00000271628 TRAF6Q9Y4K3 522 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 WASF2Q9Y6W5 498 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 MAGEA13PA6NCF6 341 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 SUPT3HB4E1H0 165 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 STX16-NPEPL1H3BU86 382 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 STX16O14662 325 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 SUPT3HO75486 399 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 CYP2A6P11509 494 aaPredicted RBP15.15■□□□□ 0.02
SF3B4-201ENST00000271628 ST8SIA6P61647 398 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 ARHGEF7Q14155 803 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 CHRNA6Q15825 494 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 CRY1Q16526 586 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 CPNE9Q8IYJ1 553 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 CLYBLQ8N0X4 340 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 NXPE1Q8N323 547 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 CPSF7Q8N684 471 aaKnown RBP15.15■□□□□ 0.02
SF3B4-201ENST00000271628 GPR26Q8NDV2 337 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 HCAR2Q8TDS4 363 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 PBXIP1Q96AQ6 731 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 ASB16Q96NS5 453 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 NR1H4Q96RI1 486 aaPredicted RBP15.15■□□□□ 0.02
SF3B4-201ENST00000271628 DZANK1Q9NVP4 752 aa15.15■□□□□ 0.02
SF3B4-201ENST00000271628 LAMA3Q16787 3333 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 CDC7O00311 574 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 TRIM24O15164 1050 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 KLK8O60259 260 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 CCNT2O60583 730 aaKnown RBP15.14■□□□□ 0.01
SF3B4-201ENST00000271628 ECI2O75521 394 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 FGF4P08620 206 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 UGT1A6P19224 532 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 UGT1A1P22309 533 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 UGT1A4P22310 534 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 FSHRP23945 695 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 UGT1A3P35503 534 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 UGT1A5P35504 534 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 NSG1P42857 185 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 RGS4P49798 205 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 KLF10Q13118 480 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 KCNC3Q14003 757 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 ANKS6Q68DC2 871 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 NXNQ6DKJ4 435 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 CYB5D2Q8WUJ1 264 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 SMARCD2Q92925 531 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 ULK4Q96C45 1275 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 PPP1R36Q96LQ0 422 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 C1QTNF3Q9BXJ4 246 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 MEAF6Q9HAF1 191 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 OBP2AQ9NY56 170 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 GDE1Q9NZC3 331 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 PKD2L2Q9NZM6 624 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 B4GALT6Q9UBX8 382 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 IL36AQ9UHA7 158 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 PDE4DIPQ5VU43 2346 aa15.14■□□□□ 0.01
SF3B4-201ENST00000271628 IQCF5A8MTL0 148 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 TTC34A8MYJ7 566 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 TMEM233B4DJY2 109 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 LEFTY1O75610 366 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 LHCGRP22888 699 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 VIPR2P41587 438 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 FAM78AQ5JUQ0 283 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 MACC1Q6ZN28 852 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 GPSM1Q86YR5 675 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 NPAS3Q8IXF0 933 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 ACTRT2Q8TDY3 377 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms