RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 MYH11P35749 1972 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 MTX2O75431 263 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 TRBC1P01850 177 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 FGFR3P22607 806 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 NRG1Q02297 640 aaPredicted RBP13.6□□□□□ -0.23
NPC1-201ENST00000269228 CDKN2AIPNLQ96HQ2 116 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 TMEM109Q9BVC6 243 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 EIF2B4Q9UI10 523 aaKnown RBP13.6□□□□□ -0.23
NPC1-201ENST00000269228 MBLAC1A4D2B0 266 aaPredicted RBP13.6□□□□□ -0.23
NPC1-201ENST00000269228 TEX28O15482 410 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 HSMCR30P0CW71 290 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 MANFP55145 182 aaKnown RBP13.6□□□□□ -0.23
NPC1-201ENST00000269228 GALNT2Q10471 571 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 CHIT1Q13231 466 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 MYLK3Q32MK0 819 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 ARHGAP36Q6ZRI8 547 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 DSELQ8IZU8 1212 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 PQLC3Q8N755 202 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 ITCHQ96J02 903 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 LGALS13Q9UHV8 139 aa13.6□□□□□ -0.23
NPC1-201ENST00000269228 CNOT3O75175 753 aaKnown RBP13.59□□□□□ -0.23
NPC1-201ENST00000269228 APOA1P02647 267 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 CDH3P22223 829 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 LCP2Q13094 533 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 GTF2H2Q13888 395 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 LSM12Q3MHD2 195 aaKnown RBP13.59□□□□□ -0.23
NPC1-201ENST00000269228 CCNYL2Q5T2Q4 361 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 GTF2H2CQ6P1K8 395 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 C15orf39Q6ZRI6 1047 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 MCMBPQ9BTE3 642 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 GATA5Q9BWX5 397 aaPredicted RBP13.59□□□□□ -0.23
NPC1-201ENST00000269228 RSPH9Q9H1X1 276 aaPredicted RBP13.59□□□□□ -0.23
NPC1-201ENST00000269228 ANGPT4Q9Y264 503 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 MYH14Q7Z406 1995 aaKnown RBP13.59□□□□□ -0.23
NPC1-201ENST00000269228 F7P08709 466 aaPredicted RBP13.59□□□□□ -0.23
NPC1-201ENST00000269228 OLIG2Q13516 323 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 CPTPQ5TA50 214 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 B3GNT9Q6UX72 402 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 LMLNQ96KR4 655 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 AP4S1Q9Y587 144 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 A0A0J9YYE9 177 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 PROZP22891 400 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 VWA5B1Q5TIE3 1220 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 NAIF1Q69YI7 327 aaPredicted RBP13.59□□□□□ -0.23
NPC1-201ENST00000269228 AMZ2Q86W34 360 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 C12orf66Q96MD2 445 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 NPAS2Q99743 824 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 TMEM248Q9NWD8 314 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 A0A0D9SEW6 157 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 NIPSNAP2O75323 286 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 OR4F21O95013 312 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 HNRNPCP07910 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
NPC1-201ENST00000269228 ANXA8L1Q5VT79 327 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 BRAT1Q6PJG6 821 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 TDRPQ86YL5 185 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 WDTC1Q8N5D0 677 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 OVCA2Q8WZ82 227 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 RAD51AP1Q96B01 352 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 C9orf16Q9BUW7 83 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 FANCEQ9HB96 536 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 ZNF229Q9UJW7 825 aa13.59□□□□□ -0.23
NPC1-201ENST00000269228 TRIM38O00635 465 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 KDELR3O43731 214 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 HLA-EP13747 358 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 VAV1P15498 845 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 GPR33Q49SQ1 333 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 GK5Q6ZS86 529 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 GPR141Q7Z602 305 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 ADHFE1Q8IWW8 467 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 TTLL2Q9BWV7 592 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 WDR26Q9H7D7 661 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 ZDHHC18Q9NUE0 388 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 EDDM13A0A1B0GTR0 161 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 ANKRD66B4E2M5 251 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 CLDN7O95471 211 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 CCR3P51677 355 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 DYNC1I2Q13409 638 aaKnown RBP13.58□□□□□ -0.24
NPC1-201ENST00000269228 QPCTQ16769 361 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 PLEKHG4Q58EX7 1191 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 SULT1C3Q6IMI6 304 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 C22orf39Q6P5X5 142 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 DHDDSQ86SQ9 333 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 DCAF4L2Q8NA75 395 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 PHC3Q8NDX5 983 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 OR4A15Q8NGL6 344 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 DLG3Q92796 817 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 GLMNQ92990 594 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 TMEM59LQ9UK28 342 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 RPS6KA6Q9UK32 745 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 RHPN2P1A8MT19 583 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 FAM20BO75063 409 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 PSMG1O95456 288 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 GSNP06396 782 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 CREB1P16220 341 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 CMPK1P30085 196 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 IFNGR2P38484 337 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 SLC7A2P52569 658 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 GHRHRQ02643 423 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 LRRC74BQ6ZQY2 392 aa13.58□□□□□ -0.24
NPC1-201ENST00000269228 IRF7Q92985 503 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms