RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 PDIK1LQ8N165 341 aa12.6□□□□□ -0.39
SS18-202ENST00000269138 FSTL5Q8N475 847 aaPredicted RBP12.6□□□□□ -0.39
SS18-202ENST00000269138 GPBAR1Q8TDU6 330 aa12.6□□□□□ -0.39
SS18-202ENST00000269138 ART4Q93070 314 aa12.6□□□□□ -0.39
SS18-202ENST00000269138 ZNF669Q96BR6 464 aaPredicted RBP12.6□□□□□ -0.39
SS18-202ENST00000269138 ULK4Q96C45 1275 aa12.6□□□□□ -0.39
SS18-202ENST00000269138 SGF29Q96ES7 293 aa12.6□□□□□ -0.39
SS18-202ENST00000269138 RMI1Q9H9A7 625 aa12.6□□□□□ -0.39
SS18-202ENST00000269138 L2HGDHQ9H9P8 463 aa12.6□□□□□ -0.39
SS18-202ENST00000269138 TRNAU1APQ9NX07 287 aaKnown RBP12.6□□□□□ -0.39
SS18-202ENST00000269138 ZDHHC3Q9NYG2 299 aa12.6□□□□□ -0.39
SS18-202ENST00000269138 SLC23A2Q9UGH3 650 aa12.6□□□□□ -0.39
SS18-202ENST00000269138 PCOLCE2Q9UKZ9 415 aa12.6□□□□□ -0.39
SS18-202ENST00000269138 CSNK1G3Q9Y6M4 447 aa12.6□□□□□ -0.39
SS18-202ENST00000269138 RPS6KL1Q9Y6S9 549 aa12.6□□□□□ -0.39
SS18-202ENST00000269138 ZNF106Q9H2Y7 1883 aaKnown RBP12.59□□□□□ -0.39
SS18-202ENST00000269138 LRP4O75096 1905 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 ZCWPW2A0A1B0GU75 182 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 DCDC2BA2VCK2 349 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 SIGLEC6O43699 453 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 SGTAO43765 313 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 ANXA6P08133 673 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 ACP5P13686 325 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 ELK3P41970 407 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 DRG2P55039 364 aaKnown RBP12.59□□□□□ -0.39
SS18-202ENST00000269138 CALCOCO2Q13137 446 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 FASTKD3Q14CZ7 662 aaKnown RBP12.59□□□□□ -0.39
SS18-202ENST00000269138 ELOCQ15369 112 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 PLA2G4EQ3MJ16 856 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 TMEM220Q6QAJ8 160 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 CHST15Q7LFX5 561 aaPredicted RBP12.59□□□□□ -0.39
SS18-202ENST00000269138 ANKMY2Q8IV38 441 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 UNC5BQ8IZJ1 945 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 OR4C6Q8NH72 309 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 TTC25Q96NG3 672 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 COPS8Q99627 209 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 EBNA1BP2Q99848 306 aaKnown RBP12.59□□□□□ -0.39
SS18-202ENST00000269138 PLAC1Q9HBJ0 212 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 CHMP2BQ9UQN3 213 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 KCNK6Q9Y257 313 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 DNAH14Q0VDD8 3507 aa12.59□□□□□ -0.39
SS18-202ENST00000269138 BPTFQ12830 3046 aa12.58□□□□□ -0.39
SS18-202ENST00000269138 IGLV3-16A0A075B6K0 115 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 NEMP2A6NFY4 417 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 OR2AG2A6NM03 316 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 GIPC1O14908 333 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 CD3EAPO15446 510 aaKnown RBP12.58□□□□□ -0.4
SS18-202ENST00000269138 OR1I1O60431 355 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 PDIA2Q13087 525 aaKnown RBP12.58□□□□□ -0.4
SS18-202ENST00000269138 GTF2H3Q13889 308 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 FASTKD1Q53R41 847 aaKnown RBP12.58□□□□□ -0.4
SS18-202ENST00000269138 ARMC3Q5W041 872 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 KIAA0930Q6ICG6 404 aaPredicted RBP12.58□□□□□ -0.4
SS18-202ENST00000269138 SLC30A9Q6PML9 568 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 LRRTM4Q86VH4 590 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 GKN2Q86XP6 184 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 TRAPPC5Q8IUR0 188 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 CLDN19Q8N6F1 224 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 BEND7Q8N7W2 519 aaPredicted RBP12.58□□□□□ -0.4
SS18-202ENST00000269138 FAM46DQ8NEK8 389 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 BAHD1Q8TBE0 780 aaPredicted RBP12.58□□□□□ -0.4
SS18-202ENST00000269138 FBXO25Q8TCJ0 367 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 SEC14L1Q92503 715 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 DCUN1D1Q96GG9 259 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 SGSM3Q96HU1 749 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 RTKNQ9BST9 563 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 EPB41L5Q9HCM4 733 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 CATSPERZQ9NTU4 200 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 SPATS2LQ9NUQ6 558 aaKnown RBP12.58□□□□□ -0.4
SS18-202ENST00000269138 DLL3Q9NYJ7 618 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 NLGN3Q9NZ94 848 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 SIRPGQ9P1W8 387 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 DOLKQ9UPQ8 538 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 TEX264Q9Y6I9 313 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 PRSS21Q9Y6M0 314 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 PLXNB3Q9ULL4 1909 aa12.58□□□□□ -0.4
SS18-202ENST00000269138 GPR89AB7ZAQ6 455 aa12.57□□□□□ -0.4
SS18-202ENST00000269138 E7ESA3 106 aa12.57□□□□□ -0.4
SS18-202ENST00000269138 NDC80O14777 642 aa12.57□□□□□ -0.4
SS18-202ENST00000269138 KMOO15229 486 aa12.57□□□□□ -0.4
SS18-202ENST00000269138 USP1O94782 785 aa12.57□□□□□ -0.4
SS18-202ENST00000269138 F7P08709 466 aaPredicted RBP12.57□□□□□ -0.4
SS18-202ENST00000269138 GPR89BP0CG08 455 aa12.57□□□□□ -0.4
SS18-202ENST00000269138 ATP1B2P14415 290 aaPredicted RBP12.57□□□□□ -0.4
SS18-202ENST00000269138 ZNF7P17097 686 aaPredicted RBP12.57□□□□□ -0.4
SS18-202ENST00000269138 PGAM1P18669 254 aa12.57□□□□□ -0.4
SS18-202ENST00000269138 ACTR1BP42025 376 aa12.57□□□□□ -0.4
SS18-202ENST00000269138 ACTR1AP61163 376 aa12.57□□□□□ -0.4
SS18-202ENST00000269138 ILF3Q12906 894 aaKnown RBP eCLIP12.57□□□□□ -0.4
SS18-202ENST00000269138 GLE1Q53GS7 698 aaKnown RBP12.57□□□□□ -0.4
SS18-202ENST00000269138 C11orf96Q7Z7L8 435 aa12.57□□□□□ -0.4
SS18-202ENST00000269138 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.57□□□□□ -0.4
SS18-202ENST00000269138 CFAP36Q96G28 342 aa12.57□□□□□ -0.4
SS18-202ENST00000269138 GSDMCQ9BYG8 508 aa12.57□□□□□ -0.4
SS18-202ENST00000269138 ZCCHC2Q9C0B9 1178 aaKnown RBP12.57□□□□□ -0.4
SS18-202ENST00000269138 KLC4Q9NSK0 619 aa12.57□□□□□ -0.4
SS18-202ENST00000269138 TAAR2Q9P1P5 351 aa12.57□□□□□ -0.4
SS18-202ENST00000269138 GPR34Q9UPC5 381 aa12.57□□□□□ -0.4
SS18-202ENST00000269138 DNAJC16Q9Y2G8 782 aa12.57□□□□□ -0.4
SS18-202ENST00000269138 FAM169AQ9Y6X4 670 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms