RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 FAM110BQ8TC76 370 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 BHMTQ93088 406 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 PBX4Q9BYU1 374 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 CD274Q9NZQ7 290 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 ASB1Q9Y576 335 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 SNX13Q9Y5W8 968 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 BACE2Q9Y5Z0 518 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.77□□□□□ -0.36
CPSF6-201ENST00000266679 MYOCOSA0A1B0GUC4 107 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.77□□□□□ -0.36
CPSF6-201ENST00000266679 STX16O14662 325 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 PFDN6O15212 129 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 PGM3O95394 542 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 CES1P23141 567 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 SLC7A1P30825 629 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 DIO3P55073 304 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 IL2P60568 153 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 RHOAP61586 193 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 GRIN2CQ14957 1233 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 NRF1Q16656 503 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 CNPY1Q3B7I2 92 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 SLC30A9Q6PML9 568 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 AMIGO2Q86SJ2 522 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 GPSM1Q86YR5 675 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 DCBLD1Q8N8Z6 715 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 RIN3Q8TB24 985 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 NAT14Q8WUY8 206 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 GPATCH1Q9BRR8 931 aaKnown RBP12.77□□□□□ -0.36
CPSF6-201ENST00000266679 HGH1Q9BTY7 390 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 COQ10BQ9H8M1 238 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 ZNF711Q9Y462 761 aa12.77□□□□□ -0.36
CPSF6-201ENST00000266679 ZBBXA8MT70 800 aa12.77□□□□□ -0.37
CPSF6-201ENST00000266679 VPS4BO75351 444 aa12.77□□□□□ -0.37
CPSF6-201ENST00000266679 TIPRLO75663 272 aa12.77□□□□□ -0.37
CPSF6-201ENST00000266679 FGBP02675 491 aa12.77□□□□□ -0.37
CPSF6-201ENST00000266679 CAPNS1P04632 268 aa12.77□□□□□ -0.37
CPSF6-201ENST00000266679 GRIA3P42263 894 aa12.77□□□□□ -0.37
CPSF6-201ENST00000266679 HSPA13P48723 471 aa12.77□□□□□ -0.37
CPSF6-201ENST00000266679 HMBOX1Q6NT76 420 aa12.77□□□□□ -0.37
CPSF6-201ENST00000266679 PRMT9Q6P2P2 845 aa12.77□□□□□ -0.37
CPSF6-201ENST00000266679 TXNDC11Q6PKC3 985 aa12.77□□□□□ -0.37
CPSF6-201ENST00000266679 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.77□□□□□ -0.375e-9■■■■■ 33.5
CPSF6-201ENST00000266679 SATL1Q86VE3 508 aa12.77□□□□□ -0.37
CPSF6-201ENST00000266679 OR2T34Q8NGX1 318 aa12.77□□□□□ -0.37
CPSF6-201ENST00000266679 OR2T3Q8NH03 318 aa12.77□□□□□ -0.37
CPSF6-201ENST00000266679 CEP295NLQ96MC4 621 aa12.77□□□□□ -0.37
CPSF6-201ENST00000266679 ACOX2Q99424 681 aa12.77□□□□□ -0.37
CPSF6-201ENST00000266679 C1orf50Q9BV19 199 aa12.77□□□□□ -0.37
CPSF6-201ENST00000266679 TRIM8Q9BZR9 551 aa12.77□□□□□ -0.37
CPSF6-201ENST00000266679 SDR39U1Q9NRG7 319 aaPredicted RBP12.77□□□□□ -0.37
CPSF6-201ENST00000266679 PAPOLBQ9NRJ5 636 aaKnown RBP12.77□□□□□ -0.37
CPSF6-201ENST00000266679 ZNF225Q9UK10 706 aa12.77□□□□□ -0.37
CPSF6-201ENST00000266679 PCDHB9Q9Y5E1 797 aa12.77□□□□□ -0.37
CPSF6-201ENST00000266679 FXYD1O00168 92 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 PITPNM1O00562 1244 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 AP1G1O43747 822 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 KLK8O60259 260 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 OBSL1O75147 1896 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 MATN4O95460 622 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 PRAMEF12O95522 483 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 CHEK2O96017 543 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 ALPIP09923 528 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 IDO1P14902 403 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 MYOGP15173 224 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 CSKP41240 450 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 YBX1P67809 324 aaKnown RBP12.76□□□□□ -0.37
CPSF6-201ENST00000266679 IRX1P78414 480 aaPredicted RBP12.76□□□□□ -0.37
CPSF6-201ENST00000266679 MYBPC1Q00872 1141 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 AARS2Q5JTZ9 985 aaKnown RBP12.76□□□□□ -0.37
CPSF6-201ENST00000266679 SPOUT1Q5T280 376 aaKnown RBP12.76□□□□□ -0.37
CPSF6-201ENST00000266679 GPRIN3Q6ZVF9 776 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 LYSMD3Q7Z3D4 306 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 OR56A4Q8NGH8 313 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 OR6K2Q8NGY2 324 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 TIFAQ96CG3 184 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 CCDC97Q96F63 343 aaPredicted RBP12.76□□□□□ -0.37
CPSF6-201ENST00000266679 IGSF21Q96ID5 467 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 PLEKHG4BQ96PX9 1271 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 SPATA16Q9BXB7 569 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 NUSAP1Q9BXS6 441 aaKnown RBP12.76□□□□□ -0.37
CPSF6-201ENST00000266679 GPR63Q9BZJ6 419 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 TM6SF2Q9BZW4 377 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 AIG1Q9NVV5 245 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 CMTM6Q9NX76 183 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 EGFL7Q9UHF1 273 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 GPR45Q9Y5Y3 372 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 OR4F21O95013 312 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 ESRRBO95718 433 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 MLYCDO95822 493 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 EFEMP2O95967 443 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 UROSP10746 265 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 BMP1P13497 986 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 ZNF26P17031 533 aaPredicted RBP12.76□□□□□ -0.37
CPSF6-201ENST00000266679 ITGB6P18564 788 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 ARL1P40616 181 aaPredicted RBP12.76□□□□□ -0.37
CPSF6-201ENST00000266679 VEPH1Q14D04 833 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 C18orf21Q32NC0 220 aaPredicted RBP12.76□□□□□ -0.37
CPSF6-201ENST00000266679 SPATA19Q7Z5L4 167 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 MFN1Q8IWA4 741 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 OR2T11Q8NH01 316 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms