RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 KIR2DS5Q14953 304 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 LINC01559Q495D7 138 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 ZNF569Q5MCW4 686 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 MANEAQ5SRI9 462 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 KAZNQ674X7 775 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 SARM1Q6SZW1 724 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 SPOCD1Q6ZMY3 1216 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 ARHGAP22Q7Z5H3 698 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 VASH2Q86V25 355 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 PHYKPLQ8IUZ5 450 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 KATNAL2Q8IYT4 538 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 ART4Q93070 314 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 PMEPA1Q969W9 287 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 MED8Q96G25 268 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 AHCYL2Q96HN2 611 aaKnown RBP9.6□□□□□ -0.87
VPS41-201ENST00000265745 SRPK1Q96SB4 655 aaKnown RBP9.6□□□□□ -0.87
VPS41-201ENST00000265745 ANP32EQ9BTT0 268 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 DDA1Q9BW61 102 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 GOLPH3Q9H4A6 298 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 KLC4Q9NSK0 619 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 OCIAD1Q9NX40 245 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 SLC39A1Q9NY26 324 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 UBP1Q9NZI7 540 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 CPNE7Q9UBL6 633 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 SLC23A2Q9UGH3 650 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 TMPRSS11EQ9UL52 423 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 SPO11Q9Y5K1 396 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 B3GALT1Q9Y5Z6 326 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 UNC13CQ8NB66 2214 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 hCG_1818297A0A087WSY0 165 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 PRR19A6NJB7 356 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 KMOO15229 486 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 DUX1O43812 170 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 MTX2O75431 263 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 CDK14O94921 469 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 ITGB2P05107 769 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 PLA2G2AP14555 144 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 SLC2A4P14672 509 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 XRCC1P18887 633 aaPredicted RBP9.59□□□□□ -0.87
VPS41-201ENST00000265745 NFKB1P19838 968 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 HMGCLP35914 325 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 EPHA4P54764 986 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 UBE2IP63279 158 aaKnown RBP9.59□□□□□ -0.87
VPS41-201ENST00000265745 LINC00303Q3SY05 128 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 KHDC1Q4VXA5 237 aaKnown RBP9.59□□□□□ -0.87
VPS41-201ENST00000265745 TFDP3Q5H9I0 405 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 KDELC1Q6UW63 502 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 ZC3H18Q86VM9 953 aaKnown RBP9.59□□□□□ -0.87
VPS41-201ENST00000265745 BPHLQ86WA6 291 aaPredicted RBP9.59□□□□□ -0.87
VPS41-201ENST00000265745 ZNF547Q8IVP9 402 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 CCDC170Q8IYT3 715 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 BMPERQ8N8U9 685 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 EXD3Q8N9H8 876 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 CCDC112Q8NEF3 446 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 DTX3LQ8TDB6 740 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 NCSTNQ92542 709 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 P3H4Q92791 437 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 NKD1Q969G9 470 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 KCTD12Q96CX2 325 aaKnown RBP9.59□□□□□ -0.87
VPS41-201ENST00000265745 PLEKHG4BQ96PX9 1271 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 FCRL5Q96RD9 977 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 VAT1Q99536 393 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.59□□□□□ -0.87
VPS41-201ENST00000265745 ASPSCR1Q9BZE9 553 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 SPRY4Q9C004 299 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 TRIM5Q9C035 493 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 TRABDQ9H4I3 376 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 STN1Q9H668 368 aaKnown RBP9.59□□□□□ -0.87
VPS41-201ENST00000265745 UCK1Q9HA47 277 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 IL26Q9NPH9 171 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 SCHIP1Q9P0W5 487 aaPredicted RBP9.59□□□□□ -0.87
VPS41-201ENST00000265745 TFR2Q9UP52 801 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 PCDHA13Q9Y5I0 950 aa9.59□□□□□ -0.87
VPS41-201ENST00000265745 LRRK1Q38SD2 2015 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 KIF26BQ2KJY2 2108 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 EFCAB7A8K855 629 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 B8ZZF3 427 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 VEGFDO43915 354 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 PRMT3O60678 531 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 SLC4A1P02730 911 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 ZNF7P17097 686 aaPredicted RBP9.58□□□□□ -0.88
VPS41-201ENST00000265745 UGT1A3P35503 534 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 SLC19A1P41440 591 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 CHRNA4P43681 627 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 MARCKSL1P49006 195 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 MC2RQ01718 297 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 TMEM115Q12893 351 aaPredicted RBP9.58□□□□□ -0.88
VPS41-201ENST00000265745 NOMO1Q15155 1222 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 SPA17Q15506 151 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 PPP2R5EQ16537 467 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 ATP13A5Q4VNC0 1218 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 C4orf48Q5BLP8 95 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 SIRPB2Q5JXA9 342 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 SNAP47Q5SQN1 464 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 DCAF12Q5T6F0 453 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 C11orf63Q6NUN7 778 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 CRTC3Q6UUV7 619 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 XKR5Q6UX68 686 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 WASH2PQ6VEQ5 465 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 BBS12Q6ZW61 710 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms