RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 GTPBP3Q969Y2 492 aaKnown RBP17.86■□□□□ 0.45
COL5A3-201ENST00000264828 MED28Q9H204 178 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 FAM237AA0A1B0GTK4 181 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 ACADLP28330 430 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 C2orf80Q0P641 193 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 LCN1P1Q5VSP4 162 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 ZYG11AQ6WRX3 759 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 SLC9A6Q92581 669 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 EXOSC8Q96B26 276 aaKnown RBP17.86■□□□□ 0.45
COL5A3-201ENST00000264828 DMRTB1Q96MA1 342 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 FGFBP2Q9BYJ0 223 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 PLK2Q9NYY3 685 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 CHST10O43529 356 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 PRKAR2AP13861 404 aaKnown RBP17.86■□□□□ 0.45
COL5A3-201ENST00000264828 CA9Q16790 459 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 C9orf57Q5W0N0 161 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 CAPN13Q6MZZ7 669 aaPredicted RBP17.86■□□□□ 0.45
COL5A3-201ENST00000264828 BEND5Q7L4P6 421 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 MAB21L3Q8N8X9 362 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 GLYATL1P3A0A0U1RQE8 302 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 DBIP07108 87 aaKnown RBP17.86■□□□□ 0.45
COL5A3-201ENST00000264828 UROSP10746 265 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 RPS9P46781 194 aaKnown RBP17.86■□□□□ 0.45
COL5A3-201ENST00000264828 IL23RQ5VWK5 629 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 ERICH5Q6P6B1 374 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 FAM156AQ8NDB6 213 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 HM13Q8TCT9 377 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 PPP1R14BQ96C90 147 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 GPR21Q99679 349 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 NECTIN3Q9NQS3 549 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 SLC27A6Q9Y2P4 619 aa17.86■□□□□ 0.45
COL5A3-201ENST00000264828 PSMD9O00233 223 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 IGFBP4P22692 258 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 ZNF460Q14592 562 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 RALGPS1Q5JS13 557 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 RTL4Q6ZR62 310 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 CHST4Q8NCG5 386 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 MFSD14AQ96MC6 490 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 RNF208Q9H0X6 261 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 ANKRD26Q9UPS8 1709 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 TREML2Q5T2D2 321 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 C17orf64Q86WR6 236 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 CPXM1Q96SM3 734 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 MFSD1Q9H3U5 465 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 CNTNAP1P78357 1384 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 WNT7AO00755 349 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 HTR1BP28222 390 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 CTNNB1P35222 781 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 KIR3DL1P43629 444 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 CCR10P46092 362 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 GRM3Q14832 879 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 PLEKHG4Q58EX7 1191 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 FRRS1Q6ZNA5 592 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 ANKRD46Q86W74 232 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 CCDC36Q8IYA8 594 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 PGRP06401 933 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 CCNHP51946 323 aaPredicted RBP17.85■□□□□ 0.45
COL5A3-201ENST00000264828 MC1RQ01726 317 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 BNIP1Q12981 228 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 ANKRD22Q5VYY1 191 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 PGAM4Q8N0Y7 254 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 FATE1Q969F0 183 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 SLC43A3Q8NBI5 491 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 HAVCR1Q96D42 359 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 TRPV5Q9NQA5 729 aa17.85■□□□□ 0.45
COL5A3-201ENST00000264828 EFNA1P20827 205 aaPredicted RBP17.84■□□□□ 0.45
COL5A3-201ENST00000264828 ZNF155Q12901 538 aaPredicted RBP17.84■□□□□ 0.45
COL5A3-201ENST00000264828 SF1Q15637 639 aaKnown RBP17.84■□□□□ 0.45
COL5A3-201ENST00000264828 RFWD3Q6PCD5 774 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 FAM129CQ86XR2 697 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 LIX1Q8N485 282 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 ZNF781Q8N8C0 355 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 CPT1BQ92523 772 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 RELTQ969Z4 430 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 HBEGFQ99075 208 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 FEM1AQ9BSK4 669 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 MRIQ9BWK5 157 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 DENND2DQ9H6A0 471 aaPredicted RBP17.84■□□□□ 0.45
COL5A3-201ENST00000264828 DNAJC11Q9NVH1 559 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 TRBV23OR9-2A0A075B6M9 112 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 TM4SF1P30408 202 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 CBX5P45973 191 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 HSPA7P48741 367 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 AQP4P55087 323 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 PTGES3Q15185 160 aaKnown RBP17.84■□□□□ 0.45
COL5A3-201ENST00000264828 USP41Q3LFD5 358 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 LIN52Q52LA3 116 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 PITRM1Q5JRX3 1037 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 KCTD8Q6ZWB6 473 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 C5orf34Q96MH7 638 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 MALT1Q9UDY8 824 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 GRIP1Q9Y3R0 1128 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 TESMINQ9Y4I5 508 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 SLC15A5A6NIM6 579 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 TOR1BO14657 336 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 NOBOXO60393 691 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 CHRM5P08912 532 aaPredicted RBP17.84■□□□□ 0.45
COL5A3-201ENST00000264828 OR4Q2P0C623 313 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 EVX2Q03828 476 aa17.84■□□□□ 0.45
COL5A3-201ENST00000264828 ARSHQ5FYA8 562 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms