RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 RBBP6Q7Z6E9 1792 aaKnown RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 GLYATL1P3A0A0U1RQE8 302 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 AVILO75366 819 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 TM7SF2O76062 418 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 OR6A2O95222 327 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 ALDOAP04075 364 aaKnown RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 DLDP09622 509 aaKnown RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 EIF4EBP2Q13542 120 aaPredicted RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 TYSND1Q2T9J0 566 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 TCEAL5Q5H9L2 206 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 SULT1C3Q6IMI6 304 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 FBXL19Q6PCT2 694 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 GATAD2AQ86YP4 633 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 GPSM1Q86YR5 675 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 TBATAQ96M53 351 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 ASB8Q9H765 288 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 PARVBQ9HBI1 364 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 ZNF229Q9UJW7 825 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 HS3ST2Q9Y278 367 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 MATN2O00339 956 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 COCHO43405 550 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 PFKPQ01813 784 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 OTOP3Q7RTS5 596 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 NLRP8Q86W28 1048 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 ZNF655Q8N720 491 aaPredicted RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 THTPAQ9BU02 230 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 ZBP1Q9H171 429 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 KLHL3Q9UH77 587 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 ST14Q9Y5Y6 855 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 BRCA1P38398 1863 aaKnown RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 FAM72CH0Y354 149 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 LYPLA1O75608 230 aaPredicted RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 EIF2S1P05198 315 aaKnown RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 ABCB1P08183 1280 aaPredicted RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 EPHA5P54756 1037 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 CDKL1Q00532 357 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 FAM72AQ5TYM5 149 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 FAM72DQ6L9T8 149 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 GET4Q7L5D6 327 aaPredicted RBP8.16□□□□□ -1.1
PTPN3-201ENST00000262539 BHLHA9Q7RTU4 235 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 FAM72BQ86X60 149 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 KLHL5Q96PQ7 755 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 ZSCAN5AQ9BUG6 496 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 SUV39H2Q9H5I1 410 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 OPTCQ9UBM4 332 aa8.16□□□□□ -1.1
PTPN3-201ENST00000262539 ZBTB14O43829 449 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 HLA-DQA2P01906 255 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 CNPP09543 421 aaKnown RBP8.15□□□□□ -1.1
PTPN3-201ENST00000262539 ESRP1Q6NXG1 681 aaKnown RBP8.15□□□□□ -1.1
PTPN3-201ENST00000262539 C22orf39Q6P5X5 142 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 NRSN1Q8IZ57 195 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 OR4K2Q8NGD2 314 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 MYLK2Q9H1R3 596 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 UBP1Q9NZI7 540 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 IL1RAPL1Q9NZN1 696 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 LEF1Q9UJU2 399 aaPredicted RBP8.15□□□□□ -1.1
PTPN3-201ENST00000262539 F11P03951 625 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 MPC1LP0DKB6 136 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 CLUP10909 449 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 HSD3B1P14060 373 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 HSD3B2P26439 372 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 NOS3P29474 1203 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 EIF2DP41214 584 aaKnown RBP8.15□□□□□ -1.1
PTPN3-201ENST00000262539 INHBCP55103 352 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 SKP1P63208 163 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 MPP2Q14168 576 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 TBC1D25Q3MII6 688 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 MBLAC2Q68D91 279 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 LRRC74BQ6ZQY2 392 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 CDK20Q8IZL9 346 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 CENPLQ8N0S6 344 aaPredicted RBP8.15□□□□□ -1.1
PTPN3-201ENST00000262539 FITM2Q8N6M3 262 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 PAAF1Q9BRP4 392 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 RAB11FIP5Q9BXF6 653 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 ALKBH4Q9NXW9 302 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 TCRBV7S3A2A0A539 114 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 GPR89AB7ZAQ6 455 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 GPR89BP0CG08 455 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 TFE3P19532 575 aaPredicted RBP8.15□□□□□ -1.1
PTPN3-201ENST00000262539 TCN1P20061 433 aaPredicted RBP8.15□□□□□ -1.1
PTPN3-201ENST00000262539 FDXRP22570 491 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 NUDT1P36639 197 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 MAGEA8P43361 318 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 RPS6KA3P51812 740 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 TXNL4AP83876 142 aaKnown RBP8.15□□□□□ -1.1
PTPN3-201ENST00000262539 LDLRAP1Q5SW96 308 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 CLP1Q92989 425 aaKnown RBP8.15□□□□□ -1.1
PTPN3-201ENST00000262539 MSANTD3Q96H12 275 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 BTBD9Q96Q07 612 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 REXO4Q9GZR2 422 aaKnown RBP8.15□□□□□ -1.1
PTPN3-201ENST00000262539 SLCO1B3Q9NPD5 702 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 ZDHHC3Q9NYG2 299 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 LRCH1Q9Y2L9 728 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 SLC28A1O00337 649 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 RGS14O43566 566 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 APOA1P02647 267 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 FGF4P08620 206 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 CR2P20023 1033 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 SLC1A2P43004 574 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 KPNB1Q14974 876 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms