RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 GPR26Q8NDV2 337 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 SPATA22Q8NHS9 363 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 C9orf43Q8TAL5 461 aaPredicted RBP12.07□□□□□ -0.48
TRAF4-202ENST00000262396 BRSK1Q8TDC3 778 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 P3H4Q92791 437 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 IMP4Q96G21 291 aaKnown RBP12.07□□□□□ -0.48
TRAF4-202ENST00000262396 SLC45A3Q96JT2 553 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 WDR24Q96S15 920 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 TIMM29Q9BSF4 260 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 FSD1LQ9BXM9 530 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 SLC12A9Q9BXP2 914 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 NHEJ1Q9H9Q4 299 aaPredicted RBP12.07□□□□□ -0.48
TRAF4-202ENST00000262396 GLOD4Q9HC38 313 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 APMAPQ9HDC9 416 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 POT1Q9NUX5 634 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 FAM153AQ9UHL3 310 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 PILRAQ9UKJ1 303 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 PKP3Q9Y446 797 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 COL6A6A6NMZ7 2263 aa12.07□□□□□ -0.48
TRAF4-202ENST00000262396 ZNF487B1APH4 448 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 F5H423 210 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-202ENST00000262396 NKX2-8O15522 239 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 MTSS1O43312 755 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 MT-CYBP00156 380 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-202ENST00000262396 XRCC1P18887 633 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-202ENST00000262396 AKT1P31749 480 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 HNRNPH3P31942 346 aaKnown RBP12.06□□□□□ -0.48
TRAF4-202ENST00000262396 NR2C2P49116 596 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 CLCNKAP51800 687 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 DRG2P55039 364 aaKnown RBP12.06□□□□□ -0.48
TRAF4-202ENST00000262396 GFERP55789 205 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 KRT33BQ14525 404 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 IHHQ14623 411 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 LLGL1Q15334 1064 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 TEX44Q53QW1 395 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 CACHD1Q5VU97 1274 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 ZDHHC20Q5W0Z9 365 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 SLC9A4Q6AI14 798 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 ARMC6Q6NXE6 501 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 C6orf15Q6UXA7 325 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-202ENST00000262396 PID1Q7Z2X4 250 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 TMC3Q7Z5M5 1100 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 VSIG1Q86XK7 387 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 RBM12BQ8IXT5 1001 aaKnown RBP12.06□□□□□ -0.48
TRAF4-202ENST00000262396 BLOC1S5Q8TDH9 187 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 APOBEC4Q8WW27 367 aaKnown RBP12.06□□□□□ -0.48
TRAF4-202ENST00000262396 STARD8Q92502 1023 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 RNF31Q96EP0 1072 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 C9orf72Q96LT7 481 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 OR6C1Q96RD1 312 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 TRABDQ9H4I3 376 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 LUC7LQ9NQ29 371 aaKnown RBP12.06□□□□□ -0.48
TRAF4-202ENST00000262396 ZNF71Q9NQZ8 489 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-202ENST00000262396 ABHD10Q9NUJ1 306 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 PDP2Q9P2J9 529 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 LNPEPQ9UIQ6 1025 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.06□□□□□ -0.48
TRAF4-202ENST00000262396 HYOU1Q9Y4L1 999 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 PCYT1BQ9Y5K3 369 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-202ENST00000262396 RPS6KL1Q9Y6S9 549 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 PIEZO2Q9H5I5 2752 aa12.06□□□□□ -0.48
TRAF4-202ENST00000262396 LOC101059948A0A1B0GTJ6 334 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 MACROD2A1Z1Q3 448 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 SUV39H1O43463 412 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 CST8O60676 142 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 PTMAP06454 111 aaKnown RBP12.05□□□□□ -0.48
TRAF4-202ENST00000262396 BPIP17213 487 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 CTNNA2P26232 953 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 PBLDP30039 288 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-202ENST00000262396 DLSTP36957 453 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 SPAM1P38567 509 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 CDC20Q12834 499 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 TMEM115Q12893 351 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-202ENST00000262396 XRCC4Q13426 336 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 SKOR2Q2VWA4 1001 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-202ENST00000262396 FAM182AQ5T1J6 154 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 LRRC38Q5VT99 294 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 FAM92BQ6ZTR7 304 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 GLT6D1Q7Z4J2 308 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 ZC3H18Q86VM9 953 aaKnown RBP12.05□□□□□ -0.48
TRAF4-202ENST00000262396 CNGA4Q8IV77 575 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 BMPERQ8N8U9 685 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 IPMKQ8NFU5 416 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 LRRC45Q96CN5 670 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 HAUS1Q96CS2 278 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 DNAJC7Q99615 494 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 UCK1Q9HA47 277 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 PDE7BQ9NP56 450 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRAF4-202ENST00000262396 HACD3Q9P035 362 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 ATMQ13315 3056 aa12.05□□□□□ -0.48
TRAF4-202ENST00000262396 A6NCN8 305 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 OR52A4PA6NMU1 304 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 AKR1B15C9JRZ8 316 aaPredicted RBP12.04□□□□□ -0.48
TRAF4-202ENST00000262396 H7C0C1 242 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 TOX3O15405 576 aaPredicted RBP12.04□□□□□ -0.48
TRAF4-202ENST00000262396 KCNJ13O60928 360 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 KIAA0754O94854 1291 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 NDUFA10O95299 355 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 MT-ND3P03897 115 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms