RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 RARS2Q5T160 578 aaKnown RBP7.69□□□□□ -1.18
GPNMB-201ENST00000258733 ANKRD40Q6AI12 368 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 TCEAL6Q6IPX3 200 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 MSANTD2Q6P1R3 559 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 VITQ6UXI7 678 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 TMEM26Q6ZUK4 368 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 SV2AQ7L0J3 742 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 OTOP1Q7RTM1 612 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 LHFPL3Q86UP9 236 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 SLC51AQ86UW1 340 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 ANKRD46Q86W74 232 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 ADGRG3Q86Y34 549 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 TMPRSS6Q8IU80 811 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 KRT78Q8N1N4 520 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 CENPIQ92674 756 aaPredicted RBP7.69□□□□□ -1.18
GPNMB-201ENST00000258733 REPS1Q96D71 796 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 TXLNGYQ9BZA5 131 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 SHARPINQ9H0F6 387 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 KCNK9Q9NPC2 374 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 MLXQ9UH92 298 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 RPH3ALQ9UNE2 315 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 PLAGL2Q9UPG8 496 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 PTPN22Q9Y2R2 807 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 FAM205CA6NFA0 338 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 AHRRA9YTQ3 701 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 H7C1Q1 480 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 CASC3O15234 703 aaKnown RBP7.69□□□□□ -1.18
GPNMB-201ENST00000258733 TSPAN3O60637 253 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 PAGE1O75459 146 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 GCNT3O95395 438 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 LY86O95711 162 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 S100A8P05109 93 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 MCF2P10911 925 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 ACADMP11310 421 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 ADRB3P13945 408 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 PTPN1P18031 435 aaKnown RBP7.69□□□□□ -1.18
GPNMB-201ENST00000258733 HNF1AP20823 631 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 RPS6KB1P23443 525 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 MPIP34949 423 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 IL12RB1P42701 662 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 PDIA2Q13087 525 aaKnown RBP7.69□□□□□ -1.18
GPNMB-201ENST00000258733 FGL2Q14314 439 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 KCNA10Q16322 511 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 MEA1Q16626 185 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 FAM98BQ52LJ0 330 aaKnown RBP7.69□□□□□ -1.18
GPNMB-201ENST00000258733 TMEM35AQ53FP2 167 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 OR2B11Q5JQS5 317 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 C9orf152Q5JTZ5 239 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 LIPJQ5W064 366 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 SEL1L3Q68CR1 1132 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 INTS5Q6P9B9 1019 aaKnown RBP7.69□□□□□ -1.18
GPNMB-201ENST00000258733 BBS12Q6ZW61 710 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 CYS1Q717R9 158 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 SLC24A5Q71RS6 500 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 POLNQ7Z5Q5 900 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 ANKS1BQ7Z6G8 1248 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 ZFAND4Q86XD8 727 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 PLCZ1Q86YW0 608 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 OR7G3Q8NG95 312 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 OR2T34Q8NGX1 318 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 PSMA8Q8TAA3 256 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 ZFAND1Q8TCF1 268 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 RILPQ96NA2 401 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 DNAJC7Q99615 494 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 PRRX2Q99811 253 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 TMEM109Q9BVC6 243 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 TLR10Q9BXR5 811 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 IL25Q9H293 177 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 EPB41L4BQ9H329 900 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 MAN1B1Q9UKM7 699 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 DLGAP4Q9Y2H0 992 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 NDUFAF1Q9Y375 327 aa7.69□□□□□ -1.18
GPNMB-201ENST00000258733 LRRC37A3O60309 1634 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 PNPLA7Q6ZV29 1317 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 A0A087WXM4 84 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 CCDC182A6NF36 153 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 DDX39AO00148 427 aaKnown RBP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 INPPL1O15357 1258 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 DFNA5O60443 496 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 MITFO75030 526 aaPredicted RBP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 TRIM3O75382 744 aaPredicted RBP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 CAMTA2O94983 1202 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 FHP07954 510 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 PKMP14618 531 aaKnown RBP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 PFKFB1P16118 471 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 HIBADHP31937 336 aaKnown RBP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 THBS2P35442 1172 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 GRM5P41594 1212 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 DMP1Q13316 513 aaPredicted RBP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 AUHQ13825 339 aaKnown RBP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 BAATQ14032 418 aaPredicted RBP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 RABGAP1LQ5R372 815 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 C6orf52Q5T4I8 152 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 DESI1Q6ICB0 168 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 XKRXQ6PP77 449 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 KYAT3Q6YP21 454 aaKnown RBP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 TPGS1Q6ZTW0 290 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 GPALPP1Q8IXQ4 340 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 ABI1Q8IZP0 508 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 DENND6BQ8NEG7 585 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms