RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 LRP8Q14114 963 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 DCUN1D3Q8IWE4 304 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 REXO1L1PQ8IX06 675 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 MOSPD2Q8NHP6 518 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 PAK6Q9NQU5 681 aaPredicted RBP13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 FBXO6Q9NRD1 293 aaPredicted RBP13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 SKAP2O75563 359 aaPredicted RBP13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 PRPS2P11908 318 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 GNAZP19086 355 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 TFEBP19484 476 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 CCNHP51946 323 aaPredicted RBP13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 PDX1P52945 283 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 EVX2Q03828 476 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 DPYSQ14117 519 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 ACAP2Q15057 778 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 PAFAH1B3Q15102 231 aaKnown RBP13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 LUZP2Q86TE4 346 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 B4GALNT2Q8NHY0 566 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 VMP1Q96GC9 406 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 EXOC2Q96KP1 924 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 TEFMQ96QE5 360 aaKnown RBP13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 MMADHCQ9H3L0 296 aaPredicted RBP13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 UBE2ZQ9H832 354 aaPredicted RBP13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 ANLNQ9NQW6 1124 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 CROTQ9UKG9 612 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 DUXAA6NLW8 204 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 FAM170BA6NMN3 283 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 LRCH4O75427 683 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 PAPSS2O95340 614 aaPredicted RBP13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 IMPDH2P12268 514 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 IDO1P14902 403 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 MAXP61244 160 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 SMAD1Q15797 465 aaKnown RBP13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 TCEAL5Q5H9L2 206 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 PLEKHS1Q5SXH7 462 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 CCNYL2Q5T2Q4 361 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 ISG20Q96AZ6 181 aaKnown RBP13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 TJP1Q07157 1748 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 DNAJA2O60884 412 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 ME2P23368 584 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 CCR4P51679 360 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 VSNL1P62760 191 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 CEP41Q9BYV8 373 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 SDCBP2Q9H190 292 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 EPS8L2Q9H6S3 715 aa13.3□□□□□ -0.28
PRPF38A-201ENST00000257181 LCA5LO95447 670 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 HOXD8P13378 290 aaPredicted RBP13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 NOS3P29474 1203 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 DUPD1Q68J44 220 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 ZMIZ2Q8NF64 920 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 ADAMTS15Q8TE58 950 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 PNPLA2Q96AD5 504 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 ALG9Q9H6U8 611 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 NOP53Q9NZM5 478 aaKnown RBP13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 ABCA3Q99758 1704 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 MTM1Q13496 603 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 PTGES3Q15185 160 aaKnown RBP13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 CST6Q15828 149 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 TCTE1Q5JU00 501 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 LIPMQ5VYY2 423 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 GALNT7Q86SF2 657 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 ZNF280BQ86YH2 543 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 SPOCK2Q92563 424 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 SLC2A13Q96QE2 648 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 PSKH2Q96QS6 385 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 LGMNQ99538 433 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 KLHL4Q9C0H6 718 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 OR2AG1Q9H205 316 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 NINJ2Q9NZG7 142 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 ZNF180Q9UJW8 692 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 ADAM30Q9UKF2 790 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 BLACEA4D250 179 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 ALBP02768 609 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 HNRNPA2B1P22626 353 aaKnown RBP13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 PROZP22891 400 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 PIK3CBP42338 1070 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 TMED10P49755 219 aaKnown RBP13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 MFSD6LQ8IWD5 586 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 DAW1Q8N136 415 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 RNF145Q96MT1 663 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 FUCA2Q9BTY2 467 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 GPR62Q9BZJ7 368 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 MS4A12Q9NXJ0 267 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 HS3ST4Q9Y661 456 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 GSTM2P28161 218 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 SLC26A3P40879 764 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 GSTM5P46439 218 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 DSC2Q02487 901 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 C12orf40Q86WS4 652 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 CAMK1DQ8IU85 385 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 NR4A3Q92570 626 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 TRIM4Q9C037 500 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 APOBEC3GQ9HC16 384 aaKnown RBP13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 FLRT1Q9NZU1 646 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 TAGLN3Q9UI15 199 aa13.29□□□□□ -0.28
PRPF38A-201ENST00000257181 NR5A2O00482 541 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 OAS1P00973 400 aaKnown RBP13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 ATP1B2P14415 290 aaPredicted RBP13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 JUPP14923 745 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms