RNA–Protein interactions for RNA: ENST00000253024.9

TRIM28-201, Transcript of tripartite motif containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM28, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-201ENST00000253024 SARDHQ9UL12 918 aa21.1■□□□□ 0.97
TRIM28-201ENST00000253024 U3KQV3 271 aa21.1■□□□□ 0.97
TRIM28-201ENST00000253024 GOLGA4Q13439 2230 aaKnown RBP21.1■□□□□ 0.97
TRIM28-201ENST00000253024 KERAO60938 352 aa21.1■□□□□ 0.97
TRIM28-201ENST00000253024 PARNO95453 639 aaKnown RBP21.1■□□□□ 0.97
TRIM28-201ENST00000253024 PRLP01236 227 aa21.1■□□□□ 0.97
TRIM28-201ENST00000253024 UGT1A1P22309 533 aa21.1■□□□□ 0.97
TRIM28-201ENST00000253024 UGT1A4P22310 534 aa21.1■□□□□ 0.97
TRIM28-201ENST00000253024 UGT1A3P35503 534 aa21.1■□□□□ 0.97
TRIM28-201ENST00000253024 UGT1A5P35504 534 aa21.1■□□□□ 0.97
TRIM28-201ENST00000253024 HSPA7P48741 367 aa21.1■□□□□ 0.97
TRIM28-201ENST00000253024 TRAP1Q12931 704 aaKnown RBP21.1■□□□□ 0.97
TRIM28-201ENST00000253024 CCDC117Q8IWD4 279 aaPredicted RBP21.1■□□□□ 0.97
TRIM28-201ENST00000253024 SLC22A15Q8IZD6 547 aa21.1■□□□□ 0.97
TRIM28-201ENST00000253024 RIN3Q8TB24 985 aa21.1■□□□□ 0.97
TRIM28-201ENST00000253024 KIAA1191Q96A73 305 aa21.1■□□□□ 0.97
TRIM28-201ENST00000253024 BIRC8Q96P09 236 aa21.1■□□□□ 0.97
TRIM28-201ENST00000253024 MRPL40Q9NQ50 206 aaKnown RBP21.1■□□□□ 0.97
TRIM28-201ENST00000253024 AGO1Q9UL18 857 aaKnown RBP21.1■□□□□ 0.97
TRIM28-201ENST00000253024 DOCK4Q8N1I0 1966 aa21.1■□□□□ 0.97
TRIM28-201ENST00000253024 UPK3BL1B0FP48 263 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 UPK3BL2E5RIL1 263 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 INSIG1O15503 277 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 MAN1A2O60476 641 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 VNN2O95498 520 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 RHOCP08134 193 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 POLR2JP52435 117 aaKnown RBP21.09■□□□□ 0.97
TRIM28-201ENST00000253024 CTSL3PQ5NE16 218 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 CARNMT1Q8N4J0 409 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 UPF1Q92900 1129 aaKnown RBP eCLIP21.09■□□□□ 0.97
TRIM28-201ENST00000253024 ERLEC1Q96DZ1 483 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 FEM1CQ96JP0 617 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 NSUN3Q9H649 340 aaKnown RBP21.09■□□□□ 0.97
TRIM28-201ENST00000253024 GID8Q9NWU2 228 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 Q9Y3F1 56 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 FADS3Q9Y5Q0 445 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 TET1Q8NFU7 2136 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 KANSL1LA0AUZ9 987 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 WASH4PA8MWX3 477 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 NOBOXO60393 691 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 OAZ2O95190 189 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 ATF6P18850 670 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 TXNL4AP83876 142 aaKnown RBP21.09■□□□□ 0.97
TRIM28-201ENST00000253024 PARP15Q460N3 678 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 ANKDD1AQ495B1 522 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 SLC24A5Q71RS6 500 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 SOCS4Q8WXH5 440 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 HAUS8Q9BT25 410 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 POLR1BQ9H9Y6 1135 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 C2orf81A6NN90 581 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 SEPT4O43236 478 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 MZF1P28698 734 aaPredicted RBP21.09■□□□□ 0.97
TRIM28-201ENST00000253024 ACADVLP49748 655 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 ENTPD1P49961 510 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 LAPTM4AQ15012 233 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 FAM117BQ6P1L5 589 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 TMEM26Q6ZUK4 368 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 LRRC49Q8IUZ0 686 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 EGFL8Q99944 293 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 NDUFA13Q9P0J0 144 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 ATXN10Q9UBB4 475 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 PCTPQ9UKL6 214 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 SCN10AQ9Y5Y9 1956 aa21.09■□□□□ 0.97
TRIM28-201ENST00000253024 CLCN2P51788 898 aa21.08■□□□□ 0.97
TRIM28-201ENST00000253024 RFTN2Q52LD8 501 aaPredicted RBP21.08■□□□□ 0.97
TRIM28-201ENST00000253024 PPP4R4Q6NUP7 873 aa21.08■□□□□ 0.97
TRIM28-201ENST00000253024 C8orf82Q6P1X6 216 aaPredicted RBP21.08■□□□□ 0.97
TRIM28-201ENST00000253024 GPRIN3Q6ZVF9 776 aa21.08■□□□□ 0.97
TRIM28-201ENST00000253024 TMCO2Q7Z6W1 182 aaPredicted RBP21.08■□□□□ 0.97
TRIM28-201ENST00000253024 DDI1Q8WTU0 396 aa21.08■□□□□ 0.97
TRIM28-201ENST00000253024 ROPN1LQ96C74 230 aa21.08■□□□□ 0.97
TRIM28-201ENST00000253024 AURKBQ96GD4 344 aaPredicted RBP21.08■□□□□ 0.97
TRIM28-201ENST00000253024 PPP1R2P1Q96PQ5 205 aa21.08■□□□□ 0.97
TRIM28-201ENST00000253024 CHID1Q9BWS9 393 aa21.08■□□□□ 0.97
TRIM28-201ENST00000253024 ADNPQ9H2P0 1102 aa21.08■□□□□ 0.97
TRIM28-201ENST00000253024 CIDEBQ9UHD4 219 aa21.08■□□□□ 0.97
TRIM28-201ENST00000253024 A0A1W2PQ67 120 aa21.08■□□□□ 0.96
TRIM28-201ENST00000253024 VPS26AO75436 327 aa21.08■□□□□ 0.96
TRIM28-201ENST00000253024 GSNP06396 782 aa21.08■□□□□ 0.96
TRIM28-201ENST00000253024 PKMP14618 531 aaKnown RBP21.08■□□□□ 0.96
TRIM28-201ENST00000253024 IDO1P14902 403 aa21.08■□□□□ 0.96
TRIM28-201ENST00000253024 CORO1AP31146 461 aaKnown RBP21.08■□□□□ 0.96
TRIM28-201ENST00000253024 IL1RL1Q01638 556 aa21.08■□□□□ 0.96
TRIM28-201ENST00000253024 TRAF2Q12933 501 aa21.08■□□□□ 0.96
TRIM28-201ENST00000253024 PMS2P3Q13401 168 aa21.08■□□□□ 0.96
TRIM28-201ENST00000253024 C6orf136Q5SQH8 315 aa21.08■□□□□ 0.96
TRIM28-201ENST00000253024 GPR141Q7Z602 305 aa21.08■□□□□ 0.96
TRIM28-201ENST00000253024 CAMK1DQ8IU85 385 aa21.08■□□□□ 0.96
TRIM28-201ENST00000253024 PDZD8Q8NEN9 1154 aa21.08■□□□□ 0.96
TRIM28-201ENST00000253024 BIRC7Q96CA5 298 aa21.08■□□□□ 0.96
TRIM28-201ENST00000253024 ITCHQ96J02 903 aa21.08■□□□□ 0.96
TRIM28-201ENST00000253024 TFB2MQ9H5Q4 396 aaKnown RBP21.08■□□□□ 0.96
TRIM28-201ENST00000253024 SYTL2Q9HCH5 934 aa21.08■□□□□ 0.96
TRIM28-201ENST00000253024 AGPAT4Q9NRZ5 378 aa21.08■□□□□ 0.96
TRIM28-201ENST00000253024 AASSQ9UDR5 926 aa21.08■□□□□ 0.96
TRIM28-201ENST00000253024 IGLV3-10A0A075B6K4 115 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 C2orf78A6NCI8 922 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 SH3BGRLO75368 114 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 CHEK2O96017 543 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 ZNF140P52738 457 aaPredicted RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms