RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 SMOXQ9NWM0 555 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 PIH1D1Q9NWS0 290 aaKnown RBP22.63■■□□□ 1.21
LSM4-201ENST00000252816 ZNF148Q9UQR1 794 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 DNAJC16Q9Y2G8 782 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 PCDHGA8Q9Y5G5 932 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 IGHV1OR21-1A0A087WYE8 117 aa22.62■■□□□ 1.21
LSM4-201ENST00000252816 LDB2O43679 373 aa22.62■■□□□ 1.21
LSM4-201ENST00000252816 CRTAMO95727 393 aa22.62■■□□□ 1.21
LSM4-201ENST00000252816 CPNE6O95741 557 aa22.62■■□□□ 1.21
LSM4-201ENST00000252816 ETS1P14921 441 aa22.62■■□□□ 1.21
LSM4-201ENST00000252816 TPH1P17752 444 aa22.62■■□□□ 1.21
LSM4-201ENST00000252816 EIF2S3P41091 472 aaKnown RBP22.62■■□□□ 1.21
LSM4-201ENST00000252816 CTSCP53634 463 aa22.62■■□□□ 1.21
LSM4-201ENST00000252816 XIAPP98170 497 aa22.62■■□□□ 1.21
LSM4-201ENST00000252816 MAP9Q49MG5 647 aa22.62■■□□□ 1.21
LSM4-201ENST00000252816 LDLRAP1Q5SW96 308 aa22.62■■□□□ 1.21
LSM4-201ENST00000252816 FOXR1Q6PIV2 292 aa22.62■■□□□ 1.21
LSM4-201ENST00000252816 C19orf48Q6RUI8 117 aa22.62■■□□□ 1.21
LSM4-201ENST00000252816 IGF2-ASQ6U949 168 aa22.62■■□□□ 1.21
LSM4-201ENST00000252816 TRAPPC5Q8IUR0 188 aa22.62■■□□□ 1.21
LSM4-201ENST00000252816 RASGEF1AQ8N9B8 481 aa22.62■■□□□ 1.21
LSM4-201ENST00000252816 ZNF578Q96N58 590 aaPredicted RBP22.62■■□□□ 1.21
LSM4-201ENST00000252816 SLC46A1Q96NT5 459 aa22.62■■□□□ 1.21
LSM4-201ENST00000252816 SEMA6CQ9H3T2 930 aa22.62■■□□□ 1.21
LSM4-201ENST00000252816 SARS2Q9NP81 518 aaKnown RBP22.62■■□□□ 1.21
LSM4-201ENST00000252816 SCHIP1Q9P0W5 487 aaPredicted RBP22.62■■□□□ 1.21
LSM4-201ENST00000252816 TMX2-CTNND1H3BSU7 103 aa22.61■■□□□ 1.21
LSM4-201ENST00000252816 CCL22O00626 93 aa22.61■■□□□ 1.21
LSM4-201ENST00000252816 SRP72O76094 671 aaKnown RBP22.61■■□□□ 1.21
LSM4-201ENST00000252816 IFNB1P01574 187 aa22.61■■□□□ 1.21
LSM4-201ENST00000252816 TMPRSS15P98073 1019 aa22.61■■□□□ 1.21
LSM4-201ENST00000252816 HHEXQ03014 270 aa22.61■■□□□ 1.21
LSM4-201ENST00000252816 CFHR1Q03591 330 aa22.61■■□□□ 1.21
LSM4-201ENST00000252816 GTF2H3Q13889 308 aa22.61■■□□□ 1.21
LSM4-201ENST00000252816 ZNF574Q6ZN55 896 aaPredicted RBP22.61■■□□□ 1.21
LSM4-201ENST00000252816 MICALCLQ6ZW33 695 aa22.61■■□□□ 1.21
LSM4-201ENST00000252816 PIM3Q86V86 326 aa22.61■■□□□ 1.21
LSM4-201ENST00000252816 GLIS1Q8NBF1 620 aa22.61■■□□□ 1.21
LSM4-201ENST00000252816 HNRNPLLQ8WVV9 542 aaKnown RBP22.61■■□□□ 1.21
LSM4-201ENST00000252816 LRRC45Q96CN5 670 aa22.61■■□□□ 1.21
LSM4-201ENST00000252816 STRADBQ9C0K7 418 aa22.61■■□□□ 1.21
LSM4-201ENST00000252816 ZNF106Q9H2Y7 1883 aaKnown RBP22.61■■□□□ 1.21
LSM4-201ENST00000252816 ETNK1Q9HBU6 452 aa22.61■■□□□ 1.21
LSM4-201ENST00000252816 KCNK4Q9NYG8 393 aa22.61■■□□□ 1.21
LSM4-201ENST00000252816 ZFYVE26Q68DK2 2539 aa22.61■■□□□ 1.21
LSM4-201ENST00000252816 NBEAQ8NFP9 2946 aa22.6■■□□□ 1.21
LSM4-201ENST00000252816 AGRPO00253 132 aa22.6■■□□□ 1.21
LSM4-201ENST00000252816 PSMD3O43242 534 aa22.6■■□□□ 1.21
LSM4-201ENST00000252816 HGFP14210 728 aa22.6■■□□□ 1.21
LSM4-201ENST00000252816 HOXB3P14651 431 aaPredicted RBP22.6■■□□□ 1.21
LSM4-201ENST00000252816 CXCR5P32302 372 aa22.6■■□□□ 1.21
LSM4-201ENST00000252816 CSF2RBP32927 897 aa22.6■■□□□ 1.21
LSM4-201ENST00000252816 ERVPABLB-1P60509 514 aa22.6■■□□□ 1.21
LSM4-201ENST00000252816 PDE1BQ01064 536 aa22.6■■□□□ 1.21
LSM4-201ENST00000252816 NFATC2Q13469 925 aa22.6■■□□□ 1.21
LSM4-201ENST00000252816 CCNG2Q16589 344 aa22.6■■□□□ 1.21
LSM4-201ENST00000252816 RAB11FIP2Q7L804 512 aa22.6■■□□□ 1.21
LSM4-201ENST00000252816 FBXO39Q8N4B4 442 aa22.6■■□□□ 1.21
LSM4-201ENST00000252816 TTC25Q96NG3 672 aa22.6■■□□□ 1.21
LSM4-201ENST00000252816 SLC38A3Q99624 504 aa22.6■■□□□ 1.21
LSM4-201ENST00000252816 ASB8Q9H765 288 aa22.6■■□□□ 1.21
LSM4-201ENST00000252816 CPNE7Q9UBL6 633 aa22.6■■□□□ 1.21
LSM4-201ENST00000252816 KIR2DS5A0A0G2JLQ3 304 aa22.59■■□□□ 1.21
LSM4-201ENST00000252816 A0A0G2JNG1 304 aa22.59■■□□□ 1.21
LSM4-201ENST00000252816 OR5K4A6NMS3 321 aa22.59■■□□□ 1.21
LSM4-201ENST00000252816 KIR2DS3K7RE56 304 aa22.59■■□□□ 1.21
LSM4-201ENST00000252816 PLD2O14939 933 aa22.59■■□□□ 1.21
LSM4-201ENST00000252816 ZW10O43264 779 aa22.59■■□□□ 1.21
LSM4-201ENST00000252816 TNFSF15O95150 251 aa22.59■■□□□ 1.21
LSM4-201ENST00000252816 FGGP02679 453 aa22.59■■□□□ 1.21
LSM4-201ENST00000252816 SLC2A4P14672 509 aa22.59■■□□□ 1.21
LSM4-201ENST00000252816 ITPKBP27987 946 aa22.59■■□□□ 1.21
LSM4-201ENST00000252816 RBMS1P29558 406 aaKnown RBP22.59■■□□□ 1.21
LSM4-201ENST00000252816 UBE2IP63279 158 aaKnown RBP22.59■■□□□ 1.21
LSM4-201ENST00000252816 EIF3IQ13347 325 aaKnown RBP22.59■■□□□ 1.21
LSM4-201ENST00000252816 SQSTM1Q13501 440 aa22.59■■□□□ 1.21
LSM4-201ENST00000252816 KIR2DS5Q14953 304 aa22.59■■□□□ 1.21
LSM4-201ENST00000252816 SEPT7Q16181 437 aaKnown RBP22.59■■□□□ 1.21
LSM4-201ENST00000252816 PHF19Q5T6S3 580 aa22.59■■□□□ 1.21
LSM4-201ENST00000252816 NAT14Q8WUY8 206 aa22.59■■□□□ 1.21
LSM4-201ENST00000252816 DNAJC1Q96KC8 554 aaKnown RBP22.59■■□□□ 1.21
LSM4-201ENST00000252816 C19orf43Q9BQ61 176 aa22.59■■□□□ 1.21
LSM4-201ENST00000252816 ZCCHC2Q9C0B9 1178 aaKnown RBP22.59■■□□□ 1.21
LSM4-201ENST00000252816 THSD1Q9NS62 852 aa22.59■■□□□ 1.21
LSM4-201ENST00000252816 OR2AG2A6NM03 316 aa22.58■■□□□ 1.21
LSM4-201ENST00000252816 AGAP14A8MT82 685 aa22.58■■□□□ 1.21
LSM4-201ENST00000252816 CDRT15L2A8MXV6 281 aa22.58■■□□□ 1.21
LSM4-201ENST00000252816 CEP104O60308 925 aa22.58■■□□□ 1.21
LSM4-201ENST00000252816 POP7O75817 140 aaKnown RBP22.58■■□□□ 1.21
LSM4-201ENST00000252816 ZSCAN5DPP0CG00 497 aa22.58■■□□□ 1.21
LSM4-201ENST00000252816 BRAFP15056 766 aa22.58■■□□□ 1.21
LSM4-201ENST00000252816 RPL10P27635 214 aaKnown RBP22.58■■□□□ 1.21
LSM4-201ENST00000252816 FDFT1P37268 417 aa22.58■■□□□ 1.21
LSM4-201ENST00000252816 POU6F1Q14863 301 aa22.58■■□□□ 1.21
LSM4-201ENST00000252816 CLPPQ16740 277 aaPredicted RBP22.58■■□□□ 1.21
LSM4-201ENST00000252816 COL28A1Q2UY09 1125 aa22.58■■□□□ 1.21
LSM4-201ENST00000252816 DRICH1Q6PGQ1 229 aaPredicted RBP22.58■■□□□ 1.21
LSM4-201ENST00000252816 TMEM220Q6QAJ8 160 aa22.58■■□□□ 1.21
LSM4-201ENST00000252816 SLC9B2Q86UD5 537 aa22.58■■□□□ 1.21
LSM4-201ENST00000252816 REXO1L1PQ8IX06 675 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms