RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 APOPT1Q96IL0 206 aa12.8□□□□□ -0.36
LSM8-201ENST00000249299 ELMO2Q96JJ3 720 aa12.8□□□□□ -0.36
LSM8-201ENST00000249299 SERAC1Q96JX3 654 aa12.8□□□□□ -0.36
LSM8-201ENST00000249299 HHIPQ96QV1 700 aa12.8□□□□□ -0.36
LSM8-201ENST00000249299 FAM96AQ9H5X1 160 aa12.8□□□□□ -0.36
LSM8-201ENST00000249299 CD84Q9UIB8 345 aa12.8□□□□□ -0.36
LSM8-201ENST00000249299 TMPRSS11EQ9UL52 423 aa12.8□□□□□ -0.36
LSM8-201ENST00000249299 GRID1Q9ULK0 1009 aa12.8□□□□□ -0.36
LSM8-201ENST00000249299 GPR34Q9UPC5 381 aa12.8□□□□□ -0.36
LSM8-201ENST00000249299 FNDC3AQ9Y2H6 1198 aaKnown RBP12.8□□□□□ -0.36
LSM8-201ENST00000249299 ACOT9Q9Y305 439 aa12.8□□□□□ -0.36
LSM8-201ENST00000249299 HS3ST3A1Q9Y663 406 aa12.8□□□□□ -0.36
LSM8-201ENST00000249299 DNMT3AQ9Y6K1 912 aaPredicted RBP12.8□□□□□ -0.36
LSM8-201ENST00000249299 OAS3Q9Y6K5 1087 aaKnown RBP12.8□□□□□ -0.36
LSM8-201ENST00000249299 ZNF106Q9H2Y7 1883 aaKnown RBP12.79□□□□□ -0.36
LSM8-201ENST00000249299 A0A096LPK6 155 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 IGHV1OR15-9A0A0B4J2B8 117 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 A0A1W2PPM1 405 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 UBA6A0AVT1 1052 aaPredicted RBP12.79□□□□□ -0.36
LSM8-201ENST00000249299 FAM47DPA6NHR8 397 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 K7ESF4 209 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 GLRA3O75311 464 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 WISP3O95389 354 aaPredicted RBP12.79□□□□□ -0.36
LSM8-201ENST00000249299 PAK4O96013 591 aaPredicted RBP12.79□□□□□ -0.36
LSM8-201ENST00000249299 FTH1P02794 183 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 C2P06681 752 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 APOA4P06727 396 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 CBSLP0DN79 551 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 MSH3P20585 1137 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 HNRNPA2B1P22626 353 aaKnown RBP12.79□□□□□ -0.36
LSM8-201ENST00000249299 AKT2P31751 481 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 CBSP35520 551 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 YPEL5P62699 121 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 PLOD1Q02809 727 aaPredicted RBP12.79□□□□□ -0.36
LSM8-201ENST00000249299 BMPR2Q13873 1038 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 PDE1CQ14123 709 aaPredicted RBP12.79□□□□□ -0.36
LSM8-201ENST00000249299 FGL2Q14314 439 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 BCL7AQ4VC05 210 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 USP39Q53GS9 565 aaKnown RBP12.79□□□□□ -0.36
LSM8-201ENST00000249299 KIAA0895LQ68EN5 471 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 PTRHD1Q6GMV3 140 aaKnown RBP12.79□□□□□ -0.36
LSM8-201ENST00000249299 LRRC8EQ6NSJ5 796 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 KYAT3Q6YP21 454 aaKnown RBP12.79□□□□□ -0.36
LSM8-201ENST00000249299 KDM7AQ6ZMT4 941 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 CLEC14AQ86T13 490 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 NKAPQ8N5F7 415 aaKnown RBP12.79□□□□□ -0.36
LSM8-201ENST00000249299 ERLEC1Q96DZ1 483 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 TOE1Q96GM8 510 aaKnown RBP12.79□□□□□ -0.36
LSM8-201ENST00000249299 PDLIM5Q96HC4 596 aaKnown RBP12.79□□□□□ -0.36
LSM8-201ENST00000249299 SPACA7Q96KW9 195 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 UBXN10Q96LJ8 280 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 LINC00615Q96LM1 132 aaPredicted RBP12.79□□□□□ -0.36
LSM8-201ENST00000249299 KLF6Q99612 283 aaPredicted RBP12.79□□□□□ -0.36
LSM8-201ENST00000249299 RMI1Q9H9A7 625 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 PRMT8Q9NR22 394 aaPredicted RBP12.79□□□□□ -0.36
LSM8-201ENST00000249299 PHPT1Q9NRX4 125 aaPredicted RBP12.79□□□□□ -0.36
LSM8-201ENST00000249299 SPATS2LQ9NUQ6 558 aaKnown RBP12.79□□□□□ -0.36
LSM8-201ENST00000249299 COQ6Q9Y2Z9 468 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 DHRS7Q9Y394 339 aa12.79□□□□□ -0.36
LSM8-201ENST00000249299 TMEM221A6NGB7 291 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 E5RI56 91 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 C3orf80F5H4A9 247 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 PRAMEF26H0Y7S4 382 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 M0R296 226 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 COPEO14579 308 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 FPGTO14772 594 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 AXIN1O15169 862 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 OR1I1O60431 355 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 KCNJ13O60928 360 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 RHOBTB1O94844 696 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 DCNP07585 359 aaKnown RBP12.78□□□□□ -0.36
LSM8-201ENST00000249299 SLC35E2BP0CK96 405 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 PRSS56P0CW18 603 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 KELP23276 732 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 OAS2P29728 719 aaKnown RBP12.78□□□□□ -0.36
LSM8-201ENST00000249299 FMO4P31512 558 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 AKT1P31749 480 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 PRSS12P56730 875 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 CDK3Q00526 305 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 B4GALNT1Q00973 533 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 TMEM115Q12893 351 aaPredicted RBP12.78□□□□□ -0.36
LSM8-201ENST00000249299 IRF4Q15306 451 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 SMAD1Q15797 465 aaKnown RBP12.78□□□□□ -0.36
LSM8-201ENST00000249299 FAM83EQ2M2I3 478 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 TTLL9Q3SXZ7 439 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 CTSL3PQ5NE16 218 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 RBM20Q5T481 1227 aaKnown RBP12.78□□□□□ -0.36
LSM8-201ENST00000249299 AGAP9Q5VTM2 703 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 RAPH1Q70E73 1250 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 TBC1D1Q86TI0 1168 aaPredicted RBP12.78□□□□□ -0.36
LSM8-201ENST00000249299 GDAP1Q8TB36 358 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 ATXN7L3BQ96GX2 97 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 TSNARE1Q96NA8 513 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 IQCGQ9H095 443 aaKnown RBP12.78□□□□□ -0.36
LSM8-201ENST00000249299 WDR26Q9H7D7 661 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 GPAMQ9HCL2 828 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 C2orf42Q9NWW7 574 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 NKIRAS1Q9NYS0 192 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 MID2Q9UJV3 735 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 MED16Q9Y2X0 877 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms