RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 ZNF483Q8TF39 744 aaPredicted RBP18.29■□□□□ 0.52
HOXC11-201ENST00000243082 RCN3Q96D15 328 aa18.29■□□□□ 0.52
HOXC11-201ENST00000243082 OTUB2Q96DC9 234 aa18.29■□□□□ 0.52
HOXC11-201ENST00000243082 SEMA4BQ9NPR2 832 aaPredicted RBP18.29■□□□□ 0.52
HOXC11-201ENST00000243082 ZDHHC7Q9NXF8 308 aa18.29■□□□□ 0.52
HOXC11-201ENST00000243082 GNPTGQ9UJJ9 305 aa18.29■□□□□ 0.52
HOXC11-201ENST00000243082 ATP6AP2A0A1C7CYW4 349 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 GOLGA8CPA6NN73 597 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 TBX10O75333 385 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 ATP6AP2O75787 350 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 PTDSS1P48651 473 aaKnown RBP18.28■□□□□ 0.52
HOXC11-201ENST00000243082 TGFBIQ15582 683 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 DSELQ8IZU8 1212 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 NXPE1Q8N323 547 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 LRRC3BQ96PB8 259 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 KCNA7Q96RP8 456 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 TACO1Q9BSH4 297 aaKnown RBP18.28■□□□□ 0.52
HOXC11-201ENST00000243082 BRD9Q9H8M2 597 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 STX18Q9P2W9 335 aaKnown RBP18.28■□□□□ 0.52
HOXC11-201ENST00000243082 CRLS1Q9UJA2 301 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 PCTPQ9UKL6 214 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 ERVW-1Q9UQF0 538 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 WASH3PC4AMC7 463 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 GPC4O75487 556 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 ITGB6P18564 788 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 MTTPP55157 894 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 PTK2BQ14289 1009 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 SQLEQ14534 574 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 RFLNAQ6ZTI6 216 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 PLPP6Q8IY26 295 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 FBXW8Q8N3Y1 598 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 EFCAB3Q8N7B9 438 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 ITFG1Q8TB96 612 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 TWIST2Q8WVJ9 160 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 ASIC4Q96FT7 647 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 PLEKHG4BQ96PX9 1271 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 TUBB1Q9H4B7 451 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 MRGBPQ9NV56 204 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 CD274Q9NZQ7 290 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 ZMYM5Q9UJ78 669 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 TMCO1Q9UM00 188 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 ASB1Q9Y576 335 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 PTGDR2Q9Y5Y4 395 aa18.28■□□□□ 0.52
HOXC11-201ENST00000243082 PRRC2BQ5JSZ5 2229 aaKnown RBP18.27■□□□□ 0.52
HOXC11-201ENST00000243082 ZNF197O14709 1029 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 PIP5K1BO14986 540 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 SLC25A14O95258 325 aaPredicted RBP18.27■□□□□ 0.52
HOXC11-201ENST00000243082 GCKP35557 465 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 NAA20P61599 178 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 GEN1Q17RS7 908 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 C16orf89Q6UX73 402 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 GDPD4Q6W3E5 623 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 MACC1Q6ZN28 852 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 GK5Q6ZS86 529 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 RBM23Q86U06 439 aaKnown RBP18.27■□□□□ 0.52
HOXC11-201ENST00000243082 HPS6Q86YV9 775 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.27■□□□□ 0.52
HOXC11-201ENST00000243082 AHI1Q8N157 1196 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 DTX3LQ8TDB6 740 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 FRS2Q8WU20 508 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 SORCS1Q8WY21 1168 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 ESAMQ96AP7 390 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 MRGPRX3Q96LB0 322 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 KLHL32Q96NJ5 620 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 HTATIP2Q9BUP3 242 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 AKTIPQ9H8T0 292 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 FBRSL1Q9HCM7 1045 aaKnown RBP18.27■□□□□ 0.52
HOXC11-201ENST00000243082 ZNF225Q9UK10 706 aa18.27■□□□□ 0.52
HOXC11-201ENST00000243082 MRPS23Q9Y3D9 190 aaKnown RBP18.27■□□□□ 0.52
HOXC11-201ENST00000243082 GRXCR1A8MXD5 290 aa18.27■□□□□ 0.51
HOXC11-201ENST00000243082 SNX2O60749 519 aa18.27■□□□□ 0.51
HOXC11-201ENST00000243082 ERFP50548 548 aa18.27■□□□□ 0.51
HOXC11-201ENST00000243082 SLC34A1Q06495 639 aa18.27■□□□□ 0.51
HOXC11-201ENST00000243082 LRRC73Q5JTD7 316 aa18.27■□□□□ 0.51
HOXC11-201ENST00000243082 SBSNQ6UWP8 590 aa18.27■□□□□ 0.51
HOXC11-201ENST00000243082 CYB5D2Q8WUJ1 264 aa18.27■□□□□ 0.51
HOXC11-201ENST00000243082 SLC2A11Q9BYW1 496 aa18.27■□□□□ 0.51
HOXC11-201ENST00000243082 UTP6Q9NYH9 597 aaKnown RBP18.27■□□□□ 0.51
HOXC11-201ENST00000243082 STOML1Q9UBI4 398 aa18.27■□□□□ 0.51
HOXC11-201ENST00000243082 B4GALT6Q9UBX8 382 aa18.27■□□□□ 0.51
HOXC11-201ENST00000243082 FBXO10Q9UK96 956 aa18.27■□□□□ 0.51
HOXC11-201ENST00000243082 POMPQ9Y244 141 aa18.27■□□□□ 0.51
HOXC11-201ENST00000243082 TRIM16O95361 564 aa18.26■□□□□ 0.51
HOXC11-201ENST00000243082 POU2F2P09086 479 aa18.26■□□□□ 0.51
HOXC11-201ENST00000243082 C1SP09871 688 aa18.26■□□□□ 0.51
HOXC11-201ENST00000243082 ALDOCP09972 364 aaKnown RBP18.26■□□□□ 0.51
HOXC11-201ENST00000243082 POLR2EP19388 210 aaKnown RBP18.26■□□□□ 0.51
HOXC11-201ENST00000243082 PRDX3P30048 256 aaKnown RBP18.26■□□□□ 0.51
HOXC11-201ENST00000243082 ZRSR2Q15696 482 aaKnown RBP18.26■□□□□ 0.51
HOXC11-201ENST00000243082 GPRC6AQ5T6X5 926 aa18.26■□□□□ 0.51
HOXC11-201ENST00000243082 FAM109BQ6ICB4 259 aaPredicted RBP18.26■□□□□ 0.51
HOXC11-201ENST00000243082 SYVN1Q86TM6 617 aa18.26■□□□□ 0.51
HOXC11-201ENST00000243082 PHYKPLQ8IUZ5 450 aa18.26■□□□□ 0.51
HOXC11-201ENST00000243082 MTIF3Q9H2K0 278 aaKnown RBP18.26■□□□□ 0.51
HOXC11-201ENST00000243082 EFCAB1Q9HAE3 211 aa18.26■□□□□ 0.51
HOXC11-201ENST00000243082 NUDT4Q9NZJ9 180 aa18.26■□□□□ 0.51
HOXC11-201ENST00000243082 TSR3Q9UJK0 312 aaKnown RBP18.26■□□□□ 0.51
HOXC11-201ENST00000243082 A0A1W2PQ67 120 aa18.25■□□□□ 0.51
HOXC11-201ENST00000243082 TTC34A8MYJ7 566 aa18.25■□□□□ 0.51
HOXC11-201ENST00000243082 PSMD12O00232 456 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms