RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 NANOGQ9H9S0 305 aa18.55■□□□□ 0.56
CPSF3-201ENST00000238112 ARIH1Q9Y4X5 557 aaPredicted RBP18.55■□□□□ 0.56
CPSF3-201ENST00000238112 ANKRD36A6QL64 1941 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 hCG_2014768A0A024R1R8 64 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 FAM234BA2RU67 622 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 SYNCRIPO60506 623 aaKnown RBP18.54■□□□□ 0.56
CPSF3-201ENST00000238112 ARL1P40616 181 aaPredicted RBP18.54■□□□□ 0.56
CPSF3-201ENST00000238112 RGRP47804 291 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 TTPAP49638 278 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 ADARP55265 1226 aaKnown RBP18.54■□□□□ 0.56
CPSF3-201ENST00000238112 OXCT1P55809 520 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 IL2P60568 153 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 ATP6AP1LQ52LC2 224 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 SLC24A5Q71RS6 500 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 PROSER1Q86XN7 944 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 OFCC1Q8IZS5 231 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 PAPD5Q8NDF8 572 aaKnown RBP18.54■□□□□ 0.56
CPSF3-201ENST00000238112 ESAMQ96AP7 390 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 LINGO1Q96FE5 620 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 VPS50Q96JG6 964 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 SEPHS2Q99611 448 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 SCUBE2Q9NQ36 999 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 SLAMF8Q9P0V8 285 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 EBF1Q9UH73 591 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 EIF2B4Q9UI10 523 aaKnown RBP18.54■□□□□ 0.56
CPSF3-201ENST00000238112 ZNF701M0R085 212 aaPredicted RBP18.54■□□□□ 0.56
CPSF3-201ENST00000238112 PFDN1O60925 122 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 ADAMTS4O75173 837 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 NIPSNAP2O75323 286 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 LPOP22079 712 aaPredicted RBP18.54■□□□□ 0.56
CPSF3-201ENST00000238112 HTR1EP28566 365 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 FAM171A1Q5VUB5 890 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 PATL1Q86TB9 770 aaKnown RBP18.54■□□□□ 0.56
CPSF3-201ENST00000238112 CDYL2Q8N8U2 506 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 LPCAT1Q8NF37 534 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 TRIB2Q92519 343 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 PIF1Q9H611 641 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 INTS7Q9NVH2 962 aaKnown RBP18.54■□□□□ 0.56
CPSF3-201ENST00000238112 FNDC3AQ9Y2H6 1198 aaKnown RBP18.54■□□□□ 0.56
CPSF3-201ENST00000238112 HEMK1Q9Y5R4 338 aaPredicted RBP18.54■□□□□ 0.56
CPSF3-201ENST00000238112 V9GYQ6 96 aa18.54■□□□□ 0.56
CPSF3-201ENST00000238112 TRIM64A6NGJ6 449 aa18.53■□□□□ 0.56
CPSF3-201ENST00000238112 OR6C75A6NL08 312 aa18.53■□□□□ 0.56
CPSF3-201ENST00000238112 E5RI56 91 aa18.53■□□□□ 0.56
CPSF3-201ENST00000238112 SEPT4O43236 478 aa18.53■□□□□ 0.56
CPSF3-201ENST00000238112 OR4F21O95013 312 aa18.53■□□□□ 0.56
CPSF3-201ENST00000238112 NPPAP01160 153 aa18.53■□□□□ 0.56
CPSF3-201ENST00000238112 MT-ND1P03886 318 aa18.53■□□□□ 0.56
CPSF3-201ENST00000238112 ENO2P09104 434 aaPredicted RBP18.53■□□□□ 0.56
CPSF3-201ENST00000238112 MC4RP32245 332 aa18.53■□□□□ 0.56
CPSF3-201ENST00000238112 EMP3P54852 163 aa18.53■□□□□ 0.56
CPSF3-201ENST00000238112 PRKG2Q13237 762 aa18.53■□□□□ 0.56
CPSF3-201ENST00000238112 HABP4Q5JVS0 413 aaKnown RBP18.53■□□□□ 0.56
CPSF3-201ENST00000238112 FAM26DQ5JW98 314 aa18.53■□□□□ 0.56
CPSF3-201ENST00000238112 C6orf136Q5SQH8 315 aa18.53■□□□□ 0.56
CPSF3-201ENST00000238112 PSAPL1Q6NUJ1 521 aa18.53■□□□□ 0.56
CPSF3-201ENST00000238112 RTN4RL1Q86UN2 441 aaPredicted RBP18.53■□□□□ 0.56
CPSF3-201ENST00000238112 GPR180Q86V85 440 aa18.53■□□□□ 0.56
CPSF3-201ENST00000238112 DCBLD1Q8N8Z6 715 aa18.53■□□□□ 0.56
CPSF3-201ENST00000238112 EEF1AKMT1Q8WVE0 214 aa18.53■□□□□ 0.56
CPSF3-201ENST00000238112 LZICQ8WZA0 190 aa18.53■□□□□ 0.56
CPSF3-201ENST00000238112 LRRC3Q9BY71 257 aa18.53■□□□□ 0.56
CPSF3-201ENST00000238112 ZFP37Q9Y6Q3 630 aaPredicted RBP18.53■□□□□ 0.56
CPSF3-201ENST00000238112 A0A0J9YVX5 310 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 OR1I1O60431 355 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 TSPAN12O95859 305 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 SLC6A4P31645 630 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 ZNF157P51786 506 aaPredicted RBP18.52■□□□□ 0.56
CPSF3-201ENST00000238112 EMX2Q04743 252 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 ZRANB3Q5FWF4 1079 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 PIANPQ8IYJ0 282 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 C12orf43Q96C57 262 aaKnown RBP18.52■□□□□ 0.56
CPSF3-201ENST00000238112 BIRC7Q96CA5 298 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 B3GALT6Q96L58 329 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 NSMCE3Q96MG7 304 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 PLEKHG4BQ96PX9 1271 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 ZNF382Q96SR6 550 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 BDH2Q9BUT1 245 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 NPLQ9BXD5 320 aaPredicted RBP18.52■□□□□ 0.56
CPSF3-201ENST00000238112 TDRD1Q9BXT4 1180 aaKnown RBP18.52■□□□□ 0.56
CPSF3-201ENST00000238112 SEZ6LQ9BYH1 1024 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 RPF2Q9H7B2 306 aaKnown RBP18.52■□□□□ 0.56
CPSF3-201ENST00000238112 FKBPLQ9UIM3 349 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 FAF1Q9UNN5 650 aaPredicted RBP18.52■□□□□ 0.56
CPSF3-201ENST00000238112 E2F3O00716 465 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 ACSL4O60488 711 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 CTGFP29279 349 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 IL12AP29459 219 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 GALK1P51570 392 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 HK3P52790 923 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 CYBRD1Q53TN4 286 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 SLC2A7Q6PXP3 512 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 ZFAND4Q86XD8 727 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 HID1Q8IV36 788 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 PROKR1Q8TCW9 393 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 CD200R1Q8TD46 325 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 NSMCE2Q96MF7 247 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 RNF145Q96MT1 663 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 SMIM14Q96QK8 99 aa18.52■□□□□ 0.56
CPSF3-201ENST00000238112 ZBED2Q9BTP6 218 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms