RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 SFRP1Q8N474 314 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 ZDHHC1Q8WTX9 485 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 MAIP1Q8WWC4 291 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 CPT1BQ92523 772 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 MAGOHBQ96A72 148 aaKnown RBP13.54□□□□□ -0.24
VEGFA-201ENST00000230480 RANBP9Q96S59 729 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 CCDC3Q9BQI4 270 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 GSDMCQ9BYG8 508 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 RMI1Q9H9A7 625 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 EIF2B3Q9NR50 452 aaKnown RBP13.54□□□□□ -0.24
VEGFA-201ENST00000230480 PCDHB1Q9Y5F3 818 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 TRBV23OR9-2A0A075B6M9 112 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 CCDC162PA2VCL2 907 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 C2orf81A6NN90 581 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 B4DGG1 531 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 PGRMC1O00264 195 aaKnown RBP13.53□□□□□ -0.24
VEGFA-201ENST00000230480 PHF2O75151 1096 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 AVILO75366 819 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 CDK14O94921 469 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 PRAMEF1O95521 474 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 KRT14P02533 472 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 APRTP07741 180 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 ARNTP27540 789 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 FOXN2P32314 431 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 ACTR1BP42025 376 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 ACTR1AP61163 376 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 CRADDP78560 199 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 CDH17Q12864 832 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 ILF3Q12906 894 aaKnown RBP eCLIP13.53□□□□□ -0.24
VEGFA-201ENST00000230480 IYDQ6PHW0 289 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 ZNF574Q6ZN55 896 aaPredicted RBP13.53□□□□□ -0.24
VEGFA-201ENST00000230480 GALNT13Q8IUC8 556 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 MPP5Q8N3R9 675 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 LILRA3Q8N6C8 439 aaPredicted RBP13.53□□□□□ -0.24
VEGFA-201ENST00000230480 BEND7Q8N7W2 519 aaPredicted RBP13.53□□□□□ -0.24
VEGFA-201ENST00000230480 SGF29Q96ES7 293 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 PRR11Q96HE9 360 aaPredicted RBP13.53□□□□□ -0.24
VEGFA-201ENST00000230480 PPP1R2P1Q96PQ5 205 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 TRIM56Q9BRZ2 755 aaKnown RBP13.53□□□□□ -0.24
VEGFA-201ENST00000230480 DDX47Q9H0S4 455 aaKnown RBP13.53□□□□□ -0.24
VEGFA-201ENST00000230480 DPEP2Q9H4A9 486 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 ASB8Q9H765 288 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 PRDM8Q9NQV8 689 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 TREX1Q9NSU2 369 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 ZNF624Q9P2J8 865 aaPredicted RBP13.53□□□□□ -0.24
VEGFA-201ENST00000230480 APPL1Q9UKG1 709 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 RIMKLBQ9ULI2 386 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 WDR37Q9Y2I8 494 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 PRSS21Q9Y6M0 314 aa13.53□□□□□ -0.24
VEGFA-201ENST00000230480 DSPP15924 2871 aaKnown RBP13.52□□□□□ -0.24
VEGFA-201ENST00000230480 LAMA5O15230 3695 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 TRABD2BA6NFA1 517 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 VEGFDO43915 354 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 CRTAMO95727 393 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 ZNF7P17097 686 aaPredicted RBP13.52□□□□□ -0.25
VEGFA-201ENST00000230480 TPSB2P20231 275 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 MC4RP32245 332 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 UBE2IP63279 158 aaKnown RBP13.52□□□□□ -0.25
VEGFA-201ENST00000230480 E2F1Q01094 437 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 LRP8Q14114 963 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 TPSAB1Q15661 275 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 TSTD2Q5T7W7 516 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 ZDHHC20Q5W0Z9 365 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 CCDC137Q6PK04 289 aaKnown RBP13.52□□□□□ -0.25
VEGFA-201ENST00000230480 B3GNT8Q7Z7M8 397 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 LINC00523Q86TU6 105 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 PHYKPLQ8IUZ5 450 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 NXPE1Q8N323 547 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 CCDC89Q8N998 374 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 SLC37A2Q8TED4 501 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 STYXQ8WUJ0 223 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 CHRAC1Q9NRG0 131 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 HOMER3Q9NSC5 361 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 KLC4Q9NSK0 619 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 LRIT1Q9P2V4 623 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 PKP3Q9Y446 797 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 ENTPD2Q9Y5L3 495 aa13.52□□□□□ -0.25
VEGFA-201ENST00000230480 NUDT21O43809 227 aaKnown RBP13.51□□□□□ -0.25
VEGFA-201ENST00000230480 POP7O75817 140 aaKnown RBP13.51□□□□□ -0.25
VEGFA-201ENST00000230480 PNLIPP16233 465 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 GLB1P16278 677 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 TCP1P17987 556 aaKnown RBP13.51□□□□□ -0.25
VEGFA-201ENST00000230480 ADRA1DP25100 572 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 NMBRP28336 390 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 CD1CP29017 333 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 SLC19A1P41440 591 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 MAGEA3P43357 314 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 FASLGP48023 281 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 VPS41P49754 854 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 DUSP3P51452 185 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-201ENST00000230480 OR1D5P58170 312 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 GPS1Q13098 491 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 CLCA4Q14CN2 919 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 DBN1Q16643 649 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 ISXQ2M1V0 245 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 PLA2G4EQ3MJ16 856 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 LRRC8BQ6P9F7 803 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 TMEM220Q6QAJ8 160 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 ABRAXAS1Q6UWZ7 409 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 SNX20Q7Z614 316 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms