RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 LAMA2P24043 3122 aaKnown RBP9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 PIP5K1BO14986 540 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 DEAF1O75398 565 aaPredicted RBP9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 CLPXO76031 633 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 HOXC13P31276 330 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 IFNA8P32881 189 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 CLCN5P51795 746 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 SEMA3AQ14563 771 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 OR4D1Q15615 310 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 GPR162Q16538 588 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 CLPPQ16740 277 aaPredicted RBP9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 ALFQ53S48 1182 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 TJAP1Q5JTD0 557 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 PPP4R4Q6NUP7 873 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 KIAA0408Q6ZU52 694 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 NEK10Q6ZWH5 1172 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 ZNF354CQ86Y25 554 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 PTGR2Q8N8N7 351 aaPredicted RBP9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 TFAP2CQ92754 450 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 TOP1MTQ969P6 601 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 PSMG2Q969U7 264 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 CCDC126Q96EE4 140 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 NPLQ9BXD5 320 aaPredicted RBP9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 PRKD2Q9BZL6 878 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 SLC25A51Q9H1U9 297 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 MID1IP1Q9NPA3 183 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 CMTM6Q9NX76 183 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 PADI4Q9UM07 663 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 H3BMM5 538 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 WISP3O95389 354 aaPredicted RBP9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 NADKO95544 446 aaPredicted RBP9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 LINC00032P0C843 101 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 ZNF865P0CJ78 1059 aaPredicted RBP9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 MTHFD1P11586 935 aaKnown RBP9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 ELK4P28324 431 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 DIO3P55073 304 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 MLLT10P55197 1068 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 SLC14A2Q15849 920 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 PFKFB4Q16877 469 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 TMTC4Q5T4D3 741 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 CRTC3Q6UUV7 619 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 CD300LGQ6UXG3 332 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 CCDC117Q8IWD4 279 aaPredicted RBP9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 DDIASQ8IXT1 998 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 AFAP1L2Q8N4X5 818 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 IMP4Q96G21 291 aaKnown RBP9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 PTPN18Q99952 460 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 ANKRD60Q9BZ19 345 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 RGS18Q9NS28 235 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 TBC1D13Q9NVG8 400 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 ARL5AQ9Y689 179 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 A0A1W2PQH9 124 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 H0YJX3 145 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 FXYD1O00168 92 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 FGF10O15520 208 aaPredicted RBP9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 SLC10A3P09131 477 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 PRKACBP22694 351 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 GRIK1P39086 918 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 STX1BP61266 288 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 BCL2A1Q16548 175 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 SIRPB2Q5JXA9 342 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 ATAD3BQ5T9A4 648 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 AFMIDQ63HM1 303 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 ERMP1Q7Z2K6 904 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 C11orf74Q86VG3 221 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 PGBD5Q8N414 524 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 TNIP2Q8NFZ5 429 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 TRPC4APQ8TEL6 797 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 DUS3LQ96G46 650 aaKnown RBP9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 TEX37Q96LM6 180 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 PKMYT1Q99640 499 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 ACBD6Q9BR61 282 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 CHID1Q9BWS9 393 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 AGO3Q9H9G7 860 aaKnown RBP9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 ATP13A1Q9HD20 1204 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 ABCC13Q9NSE7 274 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 UXTQ9UBK9 157 aaPredicted RBP9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 USP22Q9UPT9 525 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 MYADML2A6NDP7 307 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 EI24O14681 340 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 SULT1C4O75897 302 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 MTHFD2P13995 350 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 CD1DP15813 335 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 NCK1P16333 377 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 MLLT6P55198 1093 aaPredicted RBP9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 HERVK_113P63132 956 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 SELENBP1Q13228 472 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 E2F2Q14209 437 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 INAVAQ3KP66 663 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 TIGD7Q6NT04 549 aaPredicted RBP9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 RALGPS2Q86X27 583 aaPredicted RBP9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 CIR1Q86X95 450 aaPredicted RBP9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 SLC22A9Q8IVM8 553 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 CMTR2Q8IYT2 770 aaKnown RBP9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 CLYBLQ8N0X4 340 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 DHRSXQ8N5I4 330 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 ANKFN1Q8N957 763 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 ABHD11Q8NFV4 315 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 DNAJB14Q8TBM8 379 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 HM13Q8TCT9 377 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms