RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 B3GNT6Q6ZMB0 384 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 DHRS1Q96LJ7 313 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 HEPHQ9BQS7 1158 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 CDH7Q9ULB5 785 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 SORCS3Q9UPU3 1222 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 HEBP2Q9Y5Z4 205 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 RIIAD1A6NNX1 92 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 MLLT3P42568 568 aaPredicted RBP13.14□□□□□ -0.31
COL1A1-201ENST00000225964 RPS6KA3P51812 740 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 DGKEP52429 567 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 ARSJQ5FYB0 599 aaPredicted RBP13.14□□□□□ -0.31
COL1A1-201ENST00000225964 LRRC73Q5JTD7 316 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 PGM2Q96G03 612 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 RBM18Q96H35 190 aaKnown RBP13.14□□□□□ -0.31
COL1A1-201ENST00000225964 MFSD14AQ96MC6 490 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 GPR21Q99679 349 aa13.14□□□□□ -0.31
COL1A1-201ENST00000225964 GTPBP2Q9BX10 602 aaKnown RBP13.14□□□□□ -0.31
COL1A1-201ENST00000225964 SMIM28A0A1B0GU29 152 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 A0A1W2PQ72 361 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 HDAC3O15379 428 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 SERPINA6P08185 405 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 NR2F6P10588 404 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 CASRP41180 1078 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 ATG14Q6ZNE5 492 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 RALGPS2Q86X27 583 aaPredicted RBP13.13□□□□□ -0.31
COL1A1-201ENST00000225964 RASGEF1AQ8N9B8 481 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 KAT2AQ92830 837 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 NOL11Q9H8H0 719 aaKnown RBP13.13□□□□□ -0.31
COL1A1-201ENST00000225964 PRMT5O14744 637 aaPredicted RBP13.13□□□□□ -0.31
COL1A1-201ENST00000225964 LGR5O75473 907 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 UBXN7O94888 489 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 CCKBRP32239 447 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 RABGGTBP53611 331 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 IL18Q14116 193 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 PDK3Q15120 406 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 STRADAQ7RTN6 431 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 PACS2Q86VP3 889 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 OR2AJ1Q8NGZ0 328 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 SNX33Q8WV41 574 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 TDRD1Q9BXT4 1180 aaKnown RBP13.13□□□□□ -0.31
COL1A1-201ENST00000225964 PDP1Q9P0J1 537 aaPredicted RBP13.13□□□□□ -0.31
COL1A1-201ENST00000225964 WRBO00258 174 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 UROSP10746 265 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 RPL17P18621 184 aaKnown RBP13.13□□□□□ -0.31
COL1A1-201ENST00000225964 ASMTP46597 345 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 BCAP31P51572 246 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 RGS8P57771 180 aaPredicted RBP13.13□□□□□ -0.31
COL1A1-201ENST00000225964 MEA1Q16626 185 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 SLC8B1Q6J4K2 584 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 SRFBP1Q8NEF9 429 aaKnown RBP13.13□□□□□ -0.31
COL1A1-201ENST00000225964 PLD4Q96BZ4 506 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 ANKRD27Q96NW4 1050 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 GBA3Q9H227 469 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 RGS17Q9UGC6 210 aaPredicted RBP13.13□□□□□ -0.31
COL1A1-201ENST00000225964 ING4Q9UNL4 249 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 MED31Q9Y3C7 131 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 SNX10Q9Y5X0 201 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 CPQQ9Y646 472 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 ARHGEF33A8MVX0 844 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 B4DGG1 531 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 POP4O95707 220 aaKnown RBP13.13□□□□□ -0.31
COL1A1-201ENST00000225964 CYB5AP00167 134 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 ABHD2P08910 425 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 MPSTP25325 297 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 CCR10P46092 362 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 TTMPQ5BVD1 217 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 MRIQ9BWK5 157 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 MAGEL2Q9UJ55 1249 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 A0A1W2PQ67 120 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 UGT2B11O75310 529 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 ANPEPP15144 967 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 CD247P20963 164 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 VBP1P61758 197 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 RFTN2Q52LD8 501 aaPredicted RBP13.13□□□□□ -0.31
COL1A1-201ENST00000225964 MTX3Q5HYI7 312 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 PHF19Q5T6S3 580 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 GPR107Q5VW38 600 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 DENND5AQ6IQ26 1287 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 LRRN4CLQ8ND94 238 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 HAVCR1Q96D42 359 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 DPEP3Q9H4B8 488 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 FAM83DQ9H4H8 585 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 MRPS30Q9NP92 439 aaKnown RBP13.13□□□□□ -0.31
COL1A1-201ENST00000225964 A0A0X1KG70 313 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 CHST10O43529 356 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 TPST2O60704 377 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 TM7SF2O76062 418 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 HSPA7P48741 367 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 CCR3P51677 355 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 SGCBQ16585 318 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 RNF43Q68DV7 783 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 C12orf66Q96MD2 445 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 TCF12Q99081 682 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 DPYSL5Q9BPU6 564 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 LRRC19Q9H756 370 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 CLDND1Q9NY35 253 aa13.13□□□□□ -0.31
COL1A1-201ENST00000225964 ZNF541Q9H0D2 1346 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 CPED1A4D0V7 1026 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 ANXA4P09525 319 aaPredicted RBP13.12□□□□□ -0.31
COL1A1-201ENST00000225964 AHCYP23526 432 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms