RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 PIGVQ9NUD9 493 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 GGA2Q9UJY4 613 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 ITGA2P17301 1181 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 RAPSNQ13702 412 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 ADRM1Q16186 407 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 MED27Q6P2C8 311 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 FAM220AQ7Z4H9 259 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 DHDDSQ86SQ9 333 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 UNC5BQ8IZJ1 945 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 BPIFB1Q8TDL5 484 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 ZNF354BQ96LW1 612 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 CEP44Q9C0F1 390 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 WDR26Q9H7D7 661 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 C2orf71A6NGG8 1288 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 CLDN4O14493 209 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 ZNF8P17098 575 aaPredicted RBP18.3■□□□□ 0.52
CLIP2-201ENST00000223398 MSX2P35548 267 aaPredicted RBP18.3■□□□□ 0.52
CLIP2-201ENST00000223398 COX10Q12887 443 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 EPS8Q12929 822 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 GDPD4Q6W3E5 623 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 OSTM1Q86WC4 334 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 CPNE8Q86YQ8 564 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 NKD2Q969F2 451 aaPredicted RBP18.3■□□□□ 0.52
CLIP2-201ENST00000223398 AGAP2Q99490 1192 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 SUV39H2Q9H5I1 410 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 SAMHD1Q9Y3Z3 626 aaKnown RBP18.3■□□□□ 0.52
CLIP2-201ENST00000223398 MAP4K5Q9Y4K4 846 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 OR51F1A6NGY5 319 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 C9JVG2 144 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 ITGAXP20702 1163 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 PLA2G16P53816 162 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 TAF1AQ15573 450 aaPredicted RBP18.3■□□□□ 0.52
CLIP2-201ENST00000223398 OR13C4Q8NGS5 318 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 BADQ92934 168 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 C19orf60Q96EN9 201 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 MRTO4Q9UKD2 239 aaKnown RBP18.3■□□□□ 0.52
CLIP2-201ENST00000223398 INSL5Q9Y5Q6 135 aa18.3■□□□□ 0.52
CLIP2-201ENST00000223398 A0A0J9YYE9 177 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 GTF2H2Q13888 395 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 GTF2H2CQ6P1K8 395 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 SLC30A9Q6PML9 568 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 ADCY4Q8NFM4 1077 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 RP9Q8TA86 221 aaKnown RBP18.29■□□□□ 0.52
CLIP2-201ENST00000223398 DNAJB4Q9UDY4 337 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 BLKP51451 505 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 MAPK12P53778 367 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 UGT2B15P54855 530 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 BEND5Q7L4P6 421 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 IZUMO1Q8IYV9 350 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 DCUN1D5Q9BTE7 237 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 CNPPD1Q9BV87 410 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 RIOK2Q9BVS4 552 aaKnown RBP18.29■□□□□ 0.52
CLIP2-201ENST00000223398 REXO4Q9GZR2 422 aaKnown RBP18.29■□□□□ 0.52
CLIP2-201ENST00000223398 MMADHCQ9H3L0 296 aaPredicted RBP18.29■□□□□ 0.52
CLIP2-201ENST00000223398 AXIN1O15169 862 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 TP73O15350 636 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 SUV39H1O43463 412 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 ONECUT3O60422 494 aaPredicted RBP18.29■□□□□ 0.52
CLIP2-201ENST00000223398 EFNA1P20827 205 aaPredicted RBP18.29■□□□□ 0.52
CLIP2-201ENST00000223398 ACVRL1P37023 503 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 NRLP54845 237 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 AMZ2Q86W34 360 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 CADM2Q8N3J6 435 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 RNASE11Q8TAA1 199 aaKnown RBP18.29■□□□□ 0.52
CLIP2-201ENST00000223398 TWIST2Q8WVJ9 160 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 SIX2Q9NPC8 291 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 WNT9AO14904 365 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 PDE9AO76083 593 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 SLC7A2P52569 658 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 C11orf88Q6PI97 169 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 LPCAT2Q7L5N7 544 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 C8orf59Q8N0T1 100 aaPredicted RBP18.29■□□□□ 0.52
CLIP2-201ENST00000223398 FAM98AQ8NCA5 519 aaKnown RBP18.29■□□□□ 0.52
CLIP2-201ENST00000223398 PPM1MQ96MI6 270 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 HAPLN3Q96S86 360 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 IKZF3Q9UKT9 509 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 OGDHLQ9ULD0 1010 aa18.29■□□□□ 0.52
CLIP2-201ENST00000223398 IL6P05231 212 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 SLC10A3P09131 477 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 MYBPC1Q00872 1141 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 SLC38A2Q96QD8 506 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 KXD1Q9BQD3 176 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 NUDT4Q9NZJ9 180 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 EIF2B4Q9UI10 523 aaKnown RBP18.28■□□□□ 0.52
CLIP2-201ENST00000223398 GMPPBQ9Y5P6 360 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 LMO7Q8WWI1 1683 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 LOC100506127A0A0U1RQW1 187 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 TRIM24O15164 1050 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 USP46P62068 366 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 CYP4F3Q08477 520 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 XKR4Q5GH76 650 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 TRAF7Q6Q0C0 670 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 MCEMP1Q8IX19 187 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 TRIM38O00635 465 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 RYKP34925 604 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 VEGFBP49765 207 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 SLC10A7Q0GE19 358 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 ZNF57Q68EA5 555 aaPredicted RBP18.28■□□□□ 0.52
CLIP2-201ENST00000223398 ZNF280BQ86YH2 543 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 RBM18Q96H35 190 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms