RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 YAP1P46937 504 aaKnown RBP13.46□□□□□ -0.25
RAB3D-201ENST00000222120 RTP2Q5QGT7 225 aa13.46□□□□□ -0.25
RAB3D-201ENST00000222120 ISCA2Q86U28 154 aa13.46□□□□□ -0.25
RAB3D-201ENST00000222120 OR10Q1Q8NGQ4 319 aa13.46□□□□□ -0.25
RAB3D-201ENST00000222120 RTP3Q9BQQ7 232 aa13.46□□□□□ -0.25
RAB3D-201ENST00000222120 PNPLA3Q9NST1 481 aa13.46□□□□□ -0.25
RAB3D-201ENST00000222120 TBC1D23Q9NUY8 699 aa13.46□□□□□ -0.25
RAB3D-201ENST00000222120 CFAP97Q9P2B7 532 aa13.46□□□□□ -0.25
RAB3D-201ENST00000222120 GMPR2Q9P2T1 348 aaKnown RBP13.46□□□□□ -0.25
RAB3D-201ENST00000222120 LTBP1Q14766 1721 aa13.46□□□□□ -0.26
RAB3D-201ENST00000222120 ANXA5P08758 320 aa13.46□□□□□ -0.26
RAB3D-201ENST00000222120 PAX3P23760 479 aa13.46□□□□□ -0.26
RAB3D-201ENST00000222120 ST8SIA6P61647 398 aa13.46□□□□□ -0.26
RAB3D-201ENST00000222120 ABRQ12979 859 aa13.46□□□□□ -0.26
RAB3D-201ENST00000222120 OR4D1Q15615 310 aa13.46□□□□□ -0.26
RAB3D-201ENST00000222120 TTC23LQ6PF05 361 aa13.46□□□□□ -0.26
RAB3D-201ENST00000222120 C11orf96Q7Z7L8 435 aa13.46□□□□□ -0.26
RAB3D-201ENST00000222120 TRPV1Q8NER1 839 aa13.46□□□□□ -0.26
RAB3D-201ENST00000222120 PNPT1Q8TCS8 783 aaKnown RBP13.46□□□□□ -0.26
RAB3D-201ENST00000222120 PTERQ96BW5 349 aa13.46□□□□□ -0.26
RAB3D-201ENST00000222120 MRPL17Q9NRX2 175 aaKnown RBP13.46□□□□□ -0.26
RAB3D-201ENST00000222120 ANKRD66B4E2M5 251 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 EI24O14681 340 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 PRAMEF11O60813 436 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 FOXA1P55317 472 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 IRF8Q02556 426 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 SEMA3BQ13214 749 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 SYTL1Q8IYJ3 562 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 KLHDC9Q8NEP7 349 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 LRRC58Q96CX6 371 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 ZIC5Q96T25 663 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 SOX17Q9H6I2 414 aaPredicted RBP13.45□□□□□ -0.26
RAB3D-201ENST00000222120 CLK4Q9HAZ1 481 aaKnown RBP13.45□□□□□ -0.26
RAB3D-201ENST00000222120 GNPTGQ9UJJ9 305 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 BLOC1S6Q9UL45 172 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 ZNF490Q9ULM2 529 aaPredicted RBP13.45□□□□□ -0.26
RAB3D-201ENST00000222120 DNAJC15Q9Y5T4 150 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 A6NHS1 94 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 HHLA1C9JL84 531 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 MTX2O75431 263 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 DGCR6Q14129 220 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 KBTBD6Q86V97 674 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 OR10A6Q8NH74 314 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 RIBC2Q9H4K1 309 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 ATP13A3Q9H7F0 1226 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 CSNK1G1Q9HCP0 422 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 IGSF5Q9NSI5 407 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 TMEM39AQ9NV64 488 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 LMCD1Q9NZU5 365 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 KPNA3O00505 521 aaPredicted RBP13.45□□□□□ -0.26
RAB3D-201ENST00000222120 CST1P01037 141 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 UROSP10746 265 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 CD1EP15812 388 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 LSM3P62310 102 aaKnown RBP13.45□□□□□ -0.26
RAB3D-201ENST00000222120 RHDQ02161 417 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 BNIP2Q12982 314 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 IKBKEQ14164 716 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 ZNF423Q2M1K9 1284 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 CLLU1OSQ5K130 101 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 CST9Q5W186 159 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 TXNDC11Q6PKC3 985 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 SLC2A7Q6PXP3 512 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 RBFAQ8N0V3 343 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 APOLD1Q96LR9 279 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 SLC25A13Q9UJS0 675 aa13.45□□□□□ -0.26
RAB3D-201ENST00000222120 H3BSA7 217 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 ZBTB11O95625 1053 aaPredicted RBP13.44□□□□□ -0.26
RAB3D-201ENST00000222120 OGNP20774 298 aaKnown RBP13.44□□□□□ -0.26
RAB3D-201ENST00000222120 CYP4F8P98187 520 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 SPIDRQ14159 915 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 HERC3Q15034 1050 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 TAF1AQ15573 450 aaPredicted RBP13.44□□□□□ -0.26
RAB3D-201ENST00000222120 PSAPL1Q6NUJ1 521 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 HJURPQ8NCD3 748 aaPredicted RBP13.44□□□□□ -0.26
RAB3D-201ENST00000222120 GPR156Q8NFN8 814 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 BPIFB6Q8NFQ5 453 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 OR2T12Q8NG77 320 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 COPS8Q99627 209 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 TFB2MQ9H5Q4 396 aaKnown RBP13.44□□□□□ -0.26
RAB3D-201ENST00000222120 NSUN3Q9H649 340 aaKnown RBP13.44□□□□□ -0.26
RAB3D-201ENST00000222120 PCDH12Q9NPG4 1184 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 RNF186Q9NXI6 227 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 PRKAG2Q9UGJ0 569 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 KLHL33A6NCF5 533 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 MGAT4DA6NG13 374 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 M0R3G1 203 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 WDR47O94967 919 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 INHAP05111 366 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 CD1DP15813 335 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 SLC7A1P30825 629 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 CSKP41240 450 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 GPR17Q13304 367 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 FAM174BQ3ZCQ3 159 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 PIGGQ5H8A4 983 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 ADGRF1Q5T601 910 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 TNIP2Q8NFZ5 429 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 MCOLN3Q8TDD5 553 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 ELMO1Q92556 727 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 ZNF558Q96NG5 402 aa13.44□□□□□ -0.26
RAB3D-201ENST00000222120 BBS2Q9BXC9 721 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms