RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 CDKL3Q8IVW4 592 aaPredicted RBP13.52□□□□□ -0.24
GABPB1-201ENST00000220429 DEFB106AQ8N104 65 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 SVOPQ8N4V2 548 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 LPGAT1Q92604 370 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 SECISBP2Q96T21 854 aaKnown RBP13.52□□□□□ -0.24
GABPB1-201ENST00000220429 KATNAL1Q9BW62 490 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 DUSP16Q9BY84 665 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 RRAGCQ9HB90 399 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 FANCFQ9NPI8 374 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 GLTPQ9NZD2 209 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 USP3Q9Y6I4 520 aa13.52□□□□□ -0.24
GABPB1-201ENST00000220429 ATG13O75143 517 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 ZNF780AO75290 641 aaPredicted RBP13.52□□□□□ -0.25
GABPB1-201ENST00000220429 METTL18O95568 372 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 GOT1P17174 413 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 CYP2A7P20853 494 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 MATKP42679 507 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 ARCN1P48444 511 aaKnown RBP13.52□□□□□ -0.25
GABPB1-201ENST00000220429 HARS2P49590 506 aaKnown RBP13.52□□□□□ -0.25
GABPB1-201ENST00000220429 PITX1P78337 314 aaPredicted RBP13.52□□□□□ -0.25
GABPB1-201ENST00000220429 MPP1Q00013 466 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 PLA2G4EQ3MJ16 856 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 OTUD1Q5VV17 481 aaPredicted RBP13.52□□□□□ -0.25
GABPB1-201ENST00000220429 CYP2R1Q6VVX0 501 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 PLEKHM3Q6ZWE6 761 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 GDPD3Q7L5L3 318 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 STRADAQ7RTN6 431 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 FAM131BQ86XD5 332 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 CARNMT1Q8N4J0 409 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 CPA6Q8N4T0 437 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 NDNFQ8TB73 568 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 NXPE3Q969Y0 559 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 OR52B2Q96RD2 323 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 DGCR6LQ9BY27 220 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 EPS8L2Q9H6S3 715 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 PLAC1Q9HBJ0 212 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 MRPL40Q9NQ50 206 aaKnown RBP13.52□□□□□ -0.25
GABPB1-201ENST00000220429 ITM2CQ9NQX7 267 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 EIF3KQ9UBQ5 218 aaKnown RBP13.52□□□□□ -0.25
GABPB1-201ENST00000220429 TEKT2Q9UIF3 430 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 Q9Y3F1 56 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 SCN10AQ9Y5Y9 1956 aa13.52□□□□□ -0.25
GABPB1-201ENST00000220429 MYADML2A6NDP7 307 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 A8MUA0 341 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 H0Y858 1186 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 CPNE3O75131 537 aaKnown RBP13.51□□□□□ -0.25
GABPB1-201ENST00000220429 IGHA2P01877 340 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 C7P10643 843 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 ELK4P28324 431 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 ARRB2P32121 409 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 WSCD1Q658N2 575 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 NCBP2-AS2Q69YL0 99 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 C17orf99Q6UX52 265 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 PAGE2Q7Z2X7 111 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 URGCPQ8TCY9 931 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 FAM149B1Q96BN6 582 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 C9orf16Q9BUW7 83 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 POPDC2Q9HBU9 364 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 DTLQ9NZJ0 730 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 CPNE7Q9UBL6 633 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 BAG5Q9UL15 447 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.51□□□□□ -0.25
GABPB1-201ENST00000220429 SNX7Q9UNH6 387 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 VWA7Q9Y334 891 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 CXorf49A8MYA2 514 aaPredicted RBP13.51□□□□□ -0.25
GABPB1-201ENST00000220429 RNGTTO60942 597 aaKnown RBP13.51□□□□□ -0.25
GABPB1-201ENST00000220429 CD9P21926 228 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 SULT1E1P49888 294 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 ABCE1P61221 599 aaKnown RBP13.51□□□□□ -0.25
GABPB1-201ENST00000220429 IL1RL1Q01638 556 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 KIAA0319Q5VV43 1072 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 PM20D1Q6GTS8 502 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 ARSKQ6UWY0 536 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 ZNF534Q76KX8 674 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 METTL4Q8N3J2 472 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 QKIQ96PU8 341 aaKnown RBP eCLIP13.51□□□□□ -0.253e-6■■■■□ 21.4
GABPB1-201ENST00000220429 PNPLA8Q9NP80 782 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 PCDH10Q9P2E7 1040 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 FZD10Q9ULW2 581 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 MAN2B2Q9Y2E5 1009 aa13.51□□□□□ -0.25
GABPB1-201ENST00000220429 YKT6O15498 198 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 TADA2AO75478 443 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 IFNA16P05015 189 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 NPR3P17342 541 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 BTF3P20290 206 aaKnown RBP13.5□□□□□ -0.25
GABPB1-201ENST00000220429 GRK3P35626 688 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 NR2C2P49116 596 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 NDUFV1P49821 464 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 ARHGDIAP52565 204 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 MAPK12P53778 367 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 DBPQ10586 325 aaPredicted RBP13.5□□□□□ -0.25
GABPB1-201ENST00000220429 TRAP1Q12931 704 aaKnown RBP13.5□□□□□ -0.25
GABPB1-201ENST00000220429 SLC25A52Q3SY17 297 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 CYBRD1Q53TN4 286 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 AMIGO1Q86WK6 493 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 RASAL3Q86YV0 1011 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 MCUQ8NE86 351 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 FAM83FQ8NEG4 500 aaPredicted RBP13.5□□□□□ -0.25
GABPB1-201ENST00000220429 BIRC7Q96CA5 298 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 TMPRSS4Q9NRS4 437 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms