RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 CKBP12277 381 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 HRH2P25021 359 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 IL12AP29459 219 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 EEFSECP57772 596 aaKnown RBP17.12■□□□□ 0.33
USB1-201ENST00000219281 DUS1LQ6P1R4 473 aaKnown RBP17.12■□□□□ 0.33
USB1-201ENST00000219281 KCTD8Q6ZWB6 473 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 CHST15Q7LFX5 561 aaPredicted RBP17.12■□□□□ 0.33
USB1-201ENST00000219281 COG8Q96MW5 612 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 SPO11Q9Y5K1 396 aa17.12■□□□□ 0.33
USB1-201ENST00000219281 KANSL1LA0AUZ9 987 aa17.11■□□□□ 0.33
USB1-201ENST00000219281 SYCE1LA8MT33 242 aa17.11■□□□□ 0.33
USB1-201ENST00000219281 NDUFS3O75489 264 aa17.11■□□□□ 0.33
USB1-201ENST00000219281 ESRRBO95718 433 aa17.11■□□□□ 0.33
USB1-201ENST00000219281 EPOP01588 193 aa17.11■□□□□ 0.33
USB1-201ENST00000219281 SERPINF2P08697 491 aa17.11■□□□□ 0.33
USB1-201ENST00000219281 CDKN1CP49918 316 aaPredicted RBP17.11■□□□□ 0.33
USB1-201ENST00000219281 GRIK2Q13002 908 aa17.11■□□□□ 0.33
USB1-201ENST00000219281 TRIP4Q15650 581 aaPredicted RBP17.11■□□□□ 0.33
USB1-201ENST00000219281 AASDHQ4L235 1098 aaPredicted RBP17.11■□□□□ 0.33
USB1-201ENST00000219281 PYCR3Q53H96 274 aa17.11■□□□□ 0.33
USB1-201ENST00000219281 XKR7Q5GH72 579 aa17.11■□□□□ 0.33
USB1-201ENST00000219281 HABP4Q5JVS0 413 aaKnown RBP17.11■□□□□ 0.33
USB1-201ENST00000219281 TMEM26Q6ZUK4 368 aa17.11■□□□□ 0.33
USB1-201ENST00000219281 DCBLD1Q8N8Z6 715 aa17.11■□□□□ 0.33
USB1-201ENST00000219281 SNRNP27Q8WVK2 155 aaKnown RBP17.11■□□□□ 0.33
USB1-201ENST00000219281 RNF145Q96MT1 663 aa17.11■□□□□ 0.33
USB1-201ENST00000219281 CHID1Q9BWS9 393 aa17.11■□□□□ 0.33
USB1-201ENST00000219281 NUSAP1Q9BXS6 441 aaKnown RBP17.11■□□□□ 0.33
USB1-201ENST00000219281 BRINP2Q9C0B6 783 aa17.11■□□□□ 0.33
USB1-201ENST00000219281 NAA50Q9GZZ1 169 aaKnown RBP17.11■□□□□ 0.33
USB1-201ENST00000219281 PCTPQ9UKL6 214 aa17.11■□□□□ 0.33
USB1-201ENST00000219281 CDH7Q9ULB5 785 aa17.11■□□□□ 0.33
USB1-201ENST00000219281 TDRD15B5MCY1 1934 aaKnown RBP17.1■□□□□ 0.33
USB1-201ENST00000219281 SLC12A8A0AV02 714 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 SOAT2O75908 522 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 OR4D2P58180 307 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 NEDD8Q15843 81 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 C10orf120Q5SQS8 335 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 SLC2A7Q6PXP3 512 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 RALGPS2Q86X27 583 aaPredicted RBP17.1■□□□□ 0.33
USB1-201ENST00000219281 TTC9BQ8N6N2 239 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 OR4K2Q8NGD2 314 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 NLE1Q9NVX2 485 aaPredicted RBP17.1■□□□□ 0.33
USB1-201ENST00000219281 PKD2L2Q9NZM6 624 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 MARCH2Q9P0N8 246 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 SUN2Q9UH99 717 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 ZNHIT2Q9UHR6 403 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 TYW5A2RUC4 315 aaKnown RBP17.1■□□□□ 0.33
USB1-201ENST00000219281 INPPL1O15357 1258 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 NDST3O95803 873 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 PAX3P23760 479 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 DCKP27707 260 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 MRPL19P49406 292 aaKnown RBP17.1■□□□□ 0.33
USB1-201ENST00000219281 ZNF140P52738 457 aaPredicted RBP17.1■□□□□ 0.33
USB1-201ENST00000219281 ERVK-8P63133 956 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 ADARB1P78563 741 aaKnown RBP17.1■□□□□ 0.33
USB1-201ENST00000219281 PTPRNQ16849 979 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 PDCD4Q53EL6 469 aaKnown RBP17.1■□□□□ 0.33
USB1-201ENST00000219281 OTUD3Q5T2D3 398 aaPredicted RBP17.1■□□□□ 0.33
USB1-201ENST00000219281 USP51Q70EK9 711 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 RNF180Q86T96 592 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 CFAP52Q8N1V2 620 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 FNDC5Q8NAU1 212 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 LINC01599Q8WXQ3 324 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 THAP11Q96EK4 314 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 C8orf48Q96LL4 319 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 SMIM14Q96QK8 99 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 TRIB3Q96RU7 358 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 SRRDQ9UH36 339 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 ASB1Q9Y576 335 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 DOCK4Q8N1I0 1966 aa17.1■□□□□ 0.33
USB1-201ENST00000219281 A0A0D9SEW6 157 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 A0A1W2PPW3 197 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 SH3PXD2BA1X283 911 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 STX16O14662 325 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 SYNCRIPO60506 623 aaKnown RBP17.09■□□□□ 0.33
USB1-201ENST00000219281 OR4F21O95013 312 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 HTR1EP28566 365 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 EMX2Q04743 252 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 ZIK1Q3SY52 487 aaPredicted RBP17.09■□□□□ 0.33
USB1-201ENST00000219281 AARS2Q5JTZ9 985 aaKnown RBP17.09■□□□□ 0.33
USB1-201ENST00000219281 GLYATQ6IB77 296 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 EFL1Q7Z2Z2 1120 aaKnown RBP17.09■□□□□ 0.33
USB1-201ENST00000219281 PROSER1Q86XN7 944 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 COLGALT2Q8IYK4 626 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 SIDT2Q8NBJ9 832 aaKnown RBP17.09■□□□□ 0.33
USB1-201ENST00000219281 ZNF420Q8TAQ5 688 aaPredicted RBP17.09■□□□□ 0.33
USB1-201ENST00000219281 OSCP1Q8WVF1 389 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 FBXO32Q969P5 355 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 RMDN1Q96DB5 314 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 DOK1Q99704 481 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 ZNF639Q9UID6 485 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 RIMKLBQ9ULI2 386 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 ZFC3H1O60293 1989 aaKnown RBP17.09■□□□□ 0.33
USB1-201ENST00000219281 FAM234BA2RU67 622 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 MLYCDO95822 493 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 TTKP33981 857 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 HK3P52790 923 aa17.09■□□□□ 0.33
USB1-201ENST00000219281 YBEYP58557 167 aaPredicted RBP17.09■□□□□ 0.33
USB1-201ENST00000219281 BTG3Q14201 252 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms