RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 PIM1P11309 404 aaPredicted RBP13.63□□□□□ -0.23
SIX4-201ENST00000216513 ALADP13716 330 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 RPS21P63220 83 aaKnown RBP13.63□□□□□ -0.23
SIX4-201ENST00000216513 CSNK2BP67870 215 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 IL5RAQ01344 420 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 DUPD1Q68J44 220 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 ATG16L2Q8NAA4 619 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 CATSPER1Q8NEC5 780 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 STK32AQ8WU08 396 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 TWNKQ96RR1 684 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.63□□□□□ -0.23
SIX4-201ENST00000216513 CDC14AQ9UNH5 594 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 DNAJC25-GNG10A0A024R161 153 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 TRAFD1O14545 582 aaPredicted RBP13.63□□□□□ -0.23
SIX4-201ENST00000216513 GOT2P00505 430 aaKnown RBP13.63□□□□□ -0.23
SIX4-201ENST00000216513 HNRNPLP14866 589 aaKnown RBP eCLIP13.63□□□□□ -0.23
SIX4-201ENST00000216513 CCT8P50990 548 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 ZIK1Q3SY52 487 aaPredicted RBP13.63□□□□□ -0.23
SIX4-201ENST00000216513 GPRIN3Q6ZVF9 776 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 TRPV1Q8NER1 839 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 SERTAD3Q9UJW9 196 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 HCFC2Q9Y5Z7 792 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 TCRBV7S2A1N4TA0A589 114 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 RGS20O76081 388 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 ARSAP15289 507 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 H2AFXP16104 143 aaPredicted RBP13.63□□□□□ -0.23
SIX4-201ENST00000216513 IRX1P78414 480 aaPredicted RBP13.63□□□□□ -0.23
SIX4-201ENST00000216513 SLC25A3Q00325 362 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 SGCBQ16585 318 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 MON1BQ7L1V2 547 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 FGF13Q92913 245 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 ANKHQ9HCJ1 492 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 A0A1W2PQU0 124 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 FAM221BA6H8Z2 402 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 SEMA4FO95754 770 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 ITGB1P05556 798 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 NDUFS1P28331 727 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 RFTN1Q14699 578 aaPredicted RBP13.62□□□□□ -0.23
SIX4-201ENST00000216513 ZNF544Q6NX49 715 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 ERN2Q76MJ5 926 aaKnown RBP13.62□□□□□ -0.23
SIX4-201ENST00000216513 TMEM156Q8N614 296 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 MRPL43Q8N983 215 aaKnown RBP13.62□□□□□ -0.23
SIX4-201ENST00000216513 FNIP1Q8TF40 1166 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 SLC9A6Q92581 669 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 FAM124BQ9H5Z6 455 aaPredicted RBP13.62□□□□□ -0.23
SIX4-201ENST00000216513 B3GALT2O43825 422 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 NBNO60934 754 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 ZNF623O75123 536 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 APBB3O95704 486 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 RPL4P36578 427 aaKnown RBP13.62□□□□□ -0.23
SIX4-201ENST00000216513 RAB33AQ14088 237 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 TBCELQ5QJ74 424 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 LRRC8BQ6P9F7 803 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 SNX32Q86XE0 403 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 OXR1Q8N573 874 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 FBXO30Q8TB52 745 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 IL21RQ9HBE5 538 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 ZNF446Q9NWS9 450 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 A0A1W2PPM1 405 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 M0R3G1 203 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 SOX9P48436 509 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 SERPINB10P48595 397 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 CASP6P55212 293 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 ALYREFQ86V81 257 aaKnown RBP13.62□□□□□ -0.23
SIX4-201ENST00000216513 KBTBD6Q86V97 674 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 CPNE8Q86YQ8 564 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 CRYBG2Q8N1P7 616 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 SLC39A11Q8N1S5 342 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 OVCA2Q8WZ82 227 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 PPCDCQ96CD2 204 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 TMEM79Q9BSE2 394 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 HCSTQ9UBK5 93 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 BACE2Q9Y5Z0 518 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 C2CD4BA6NLJ0 364 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 TTC34A8MYJ7 566 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 LEFTY1O75610 366 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 MLYCDO95822 493 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 PLA2G16P53816 162 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 C16orf72Q14CZ0 275 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 R3HCC1LQ7Z5L2 792 aaKnown RBP13.62□□□□□ -0.23
SIX4-201ENST00000216513 METTL27Q8N6F8 245 aaPredicted RBP13.62□□□□□ -0.23
SIX4-201ENST00000216513 OR10T2Q8NGX3 314 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 CLHC1Q8NHS4 586 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 RAD51AP1Q96B01 352 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 CASD1Q96PB1 797 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 C3orf14Q9HBI5 128 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 APOBEC3BQ9UH17 382 aaKnown RBP13.62□□□□□ -0.23
SIX4-201ENST00000216513 ARFGEF2Q9Y6D5 1785 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 COL2A1P02458 1487 aaPredicted RBP13.62□□□□□ -0.23
SIX4-201ENST00000216513 PIGRP01833 764 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 STXBP1P61764 594 aaKnown RBP13.62□□□□□ -0.23
SIX4-201ENST00000216513 EPS8Q12929 822 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 TYW3Q6IPR3 259 aaKnown RBP13.62□□□□□ -0.23
SIX4-201ENST00000216513 CERS6Q6ZMG9 384 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 EXOSC8Q96B26 276 aaKnown RBP13.62□□□□□ -0.23
SIX4-201ENST00000216513 LRRC39Q96DD0 335 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 RNF145Q96MT1 663 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 MBOAT7Q96N66 472 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 TMEM245Q9H330 911 aa13.62□□□□□ -0.23
SIX4-201ENST00000216513 EFCAB1Q9HAE3 211 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms