RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 TMED10P49755 219 aaKnown RBP11.24□□□□□ -0.61
CDKL1-201ENST00000216378 CLCN5P51795 746 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 PLK1P53350 603 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 GRM3Q14832 879 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 CHI3L2Q15782 390 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 NAPEPLDQ6IQ20 393 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 KDELC1Q6UW63 502 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 BMP8AQ7Z5Y6 402 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 SLC41A1Q8IVJ1 513 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 AGR3Q8TD06 166 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 TCF12Q99081 682 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 CEP44Q9C0F1 390 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 B3GNT4Q9C0J1 378 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 NSRP1Q9H0G5 558 aaKnown RBP11.24□□□□□ -0.61
CDKL1-201ENST00000216378 PRSS16Q9NQE7 514 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 SNX15Q9NRS6 342 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 SERGEFQ9UGK8 458 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 FAM237BA0A1B0GVD1 139 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 PRR33A8MZF0 331 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.24□□□□□ -0.61
CDKL1-201ENST00000216378 ITM2AO43736 263 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 FOXD2O60548 495 aaPredicted RBP11.24□□□□□ -0.61
CDKL1-201ENST00000216378 HOXB2P14652 356 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 CCR10P46092 362 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 MAPKAPK2P49137 400 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 ARSDP51689 593 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 COPAP53621 1224 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 ITGA9Q13797 1035 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 ENPP2Q13822 863 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 NDUFA5Q16718 116 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 SPANXN3Q5MJ09 141 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 C9orf64Q5T6V5 341 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 VASH1Q7L8A9 365 aaPredicted RBP11.24□□□□□ -0.61
CDKL1-201ENST00000216378 PTAR1Q7Z6K3 402 aaPredicted RBP11.24□□□□□ -0.61
CDKL1-201ENST00000216378 LZTR1Q8N653 840 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 ARRDC2Q8TBH0 407 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 BLOC1S5Q8TDH9 187 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 CDKL2Q92772 493 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 VAT1Q99536 393 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 FBXO6Q9NRD1 293 aaPredicted RBP11.24□□□□□ -0.61
CDKL1-201ENST00000216378 EBF1Q9UH73 591 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 SOX13Q9UN79 622 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 ARL5AQ9Y689 179 aa11.24□□□□□ -0.61
CDKL1-201ENST00000216378 DOCK9Q9BZ29 2069 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 CKAP5Q14008 2032 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 USP1O94782 785 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 AHSGP02765 367 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 TDGF1P13385 188 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 NTSR1P30989 418 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 NDST2P52849 883 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 SEMG2Q02383 582 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 CYTH1Q15438 398 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 LRRC73Q5JTD7 316 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 SIRPB2Q5JXA9 342 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 RANBP10Q6VN20 620 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 PATL1Q86TB9 770 aaKnown RBP11.23□□□□□ -0.61
CDKL1-201ENST00000216378 C1orf210Q8IVY1 113 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 STK40Q8N2I9 435 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 DCAF4L2Q8NA75 395 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 DTWD2Q8NBA8 298 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 PDCD6IPQ8WUM4 868 aaKnown RBP11.23□□□□□ -0.61
CDKL1-201ENST00000216378 HMGB4Q8WW32 186 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 IMP4Q96G21 291 aaKnown RBP11.23□□□□□ -0.61
CDKL1-201ENST00000216378 NUDCD1Q96RS6 583 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 SHCBP1LQ9BZQ2 653 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 IL22Q9GZX6 179 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 MMP17Q9ULZ9 603 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 PLA2G4CQ9UP65 541 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 CHKBQ9Y259 395 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 MRPS17Q9Y2R5 130 aaKnown RBP11.23□□□□□ -0.61
CDKL1-201ENST00000216378 AAR2Q9Y312 384 aaKnown RBP11.23□□□□□ -0.61
CDKL1-201ENST00000216378 ZNF292O60281 2723 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 EML5Q05BV3 1969 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 LINC00854A0A1B0GVQ3 168 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 SMIM31A0A1B0GVY4 71 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 TCRBV21S2A2A0A5A6 115 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 TM9SF1O15321 606 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 KDELR3O43731 214 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 ANXA9O76027 345 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 HAUS5O94927 633 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 GSRP00390 522 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 DHRS4L1P0CG22 281 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 GABRG2P18507 467 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 NDUFV2P19404 249 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 SLC1A2P43004 574 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 RPS9P46781 194 aaKnown RBP11.23□□□□□ -0.61
CDKL1-201ENST00000216378 NPY2RP49146 381 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 RENBPP51606 427 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 ZNF135P52742 658 aaPredicted RBP11.23□□□□□ -0.61
CDKL1-201ENST00000216378 GEMP55040 296 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 BST1Q10588 318 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 LGSNQ5TDP6 509 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 TIGD7Q6NT04 549 aaPredicted RBP11.23□□□□□ -0.61
CDKL1-201ENST00000216378 DPY19L3Q6ZPD9 716 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 NUDCD3Q8IVD9 361 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 PRSS33Q8NF86 280 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 OR2A12Q8NGT7 310 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 VMP1Q96GC9 406 aa11.23□□□□□ -0.61
CDKL1-201ENST00000216378 DNAJC1Q96KC8 554 aaKnown RBP11.23□□□□□ -0.61
CDKL1-201ENST00000216378 FAM129BQ96TA1 746 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms