RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 TEX44Q53QW1 395 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 PIWIL4Q7Z3Z4 852 aaKnown RBP13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 RASGEF1CQ8N431 466 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 HEXDCQ8WVB3 486 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 PSMD4P55036 377 aaKnown RBP13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 RAB25P57735 213 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 LAPTM5Q13571 262 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 AKAP14Q86UN6 197 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 ZNF655Q8N720 491 aaPredicted RBP13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 ZNF366Q8N895 744 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 HJURPQ8NCD3 748 aaPredicted RBP13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 ZMIZ2Q8NF64 920 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 TBC1D17Q9HA65 648 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 KCND1Q9NSA2 647 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 HAT1O14929 419 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 MATN4O95460 622 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 FUT2Q10981 343 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 DCLRE1AQ6PJP8 1040 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 YTHDF3Q7Z739 585 aaKnown RBP13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 RBFAQ8N0V3 343 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 DMTF1Q9Y222 760 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 KAT6AQ92794 2004 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 GRM5P41594 1212 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 SMYD5Q6GMV2 418 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 CPNE9Q8IYJ1 553 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 STARD8Q92502 1023 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 ZNF570Q96NI8 536 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 ALKBH4Q9NXW9 302 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 SEC14L3Q9UDX4 400 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 TELO2Q9Y4R8 837 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 STX16-NPEPL1H3BU86 382 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 DNAJA2O60884 412 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 PRAMEF1O95521 474 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 CDH12P55289 794 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 GAD2Q05329 585 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 ADAMTSL2Q86TH1 951 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 ZNF280BQ86YH2 543 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 OR2T34Q8NGX1 318 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 OR2T3Q8NH03 318 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 AMBNQ9NP70 447 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 RAPGEFL1Q9UHV5 662 aa13.51□□□□□ -0.25
TGFBR3-201ENST00000212355 FAM237AA0A1B0GTK4 181 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 MYBPHLA2RUH7 354 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 CILPO75339 1184 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 MTX2O75431 263 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 CSH1P0DML2 217 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 CSH2P0DML3 217 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 MMP8P22894 467 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 IRAK1BP1Q5VVH5 260 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 TOP1MTQ969P6 601 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 GBA3Q9H227 469 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 RHOJQ9H4E5 214 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 COQ10BQ9H8M1 238 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 RNASEH2AO75792 299 aaKnown RBP13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 BNIP2Q12982 314 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 ZNF846Q147U1 533 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 NDUFA5Q16718 116 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 PABPC1LQ4VXU2 614 aaKnown RBP13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 PLPPR4Q7Z2D5 763 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 FKBPLQ9UIM3 349 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 PSME2Q9UL46 239 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 CFAP20Q9Y6A4 193 aaKnown RBP13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 TSPAN1O60635 241 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 SCGNO76038 276 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 LRIG2O94898 1065 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 IFI30P13284 250 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 MAN2A2P49641 1150 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 CLCQ05315 142 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 MAP2K5Q13163 448 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 CROCCP3Q8IVE0 287 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 AUTS2Q8WXX7 1259 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 CADM1Q9BY67 442 aaKnown RBP13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 ADRA1BP35368 520 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 PTGIRP43119 386 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 JAM2P57087 298 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 RTP1P59025 263 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 TXNRD3NBQ6F5E7 133 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 TAC4Q86UU9 113 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 NAXEQ8NCW5 288 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 DNAJA3Q96EY1 480 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 EXD2Q9NVH0 621 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 ENOPH1Q9UHY7 261 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 DHRS7Q9Y394 339 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 PPLO60437 1756 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 A0A088AWK7 358 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 TNFRSF11BO00300 401 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 ZNF10P21506 573 aaPredicted RBP13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 RIPK1Q13546 671 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 CHST9Q7L1S5 443 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 FIBCD1Q8N539 461 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 ARL14EPQ8N8R7 260 aaPredicted RBP13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 SLC43A3Q8NBI5 491 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 SETD6Q8TBK2 473 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 PYCR2Q96C36 320 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 COX4I2Q96KJ9 171 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 QRFPRQ96P65 431 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 HTATIP2Q9BUP3 242 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 C1QTNF7Q9BXJ2 289 aa13.5□□□□□ -0.25
TGFBR3-201ENST00000212355 TDRD1Q9BXT4 1180 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms