RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 COPS8Q99627 209 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 C19orf43Q9BQ61 176 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 L2HGDHQ9H9P8 463 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 EPB41L5Q9HCM4 733 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 SIRPGQ9P1W8 387 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 WHRNQ9P202 907 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 FAM8A1Q9UBU6 413 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 SLC23A2Q9UGH3 650 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 PCOLCE2Q9UKZ9 415 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 DOLKQ9UPQ8 538 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 DNAJC16Q9Y2G8 782 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 TP53BP1Q12888 1972 aaPredicted RBP11.89□□□□□ -0.51
SYPL1-201ENST00000011473 TRBV5-4A0A0C4DH59 114 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 ZCWPW2A0A1B0GU75 182 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 SLC30A4O14863 429 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 FLRT2O43155 660 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 GRK6P43250 576 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 ARCN1P48444 511 aaKnown RBP11.89□□□□□ -0.51
SYPL1-201ENST00000011473 ARL4CP56559 192 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 PDIA2Q13087 525 aaKnown RBP11.89□□□□□ -0.51
SYPL1-201ENST00000011473 SUZ12Q15022 739 aaKnown RBP11.89□□□□□ -0.51
SYPL1-201ENST00000011473 ELOCQ15369 112 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 TMEM135Q86UB9 458 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 OTUD6BQ8N6M0 293 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 PEX13Q92968 403 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 CFAP36Q96G28 342 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 MRM3Q9HC36 420 aaKnown RBP11.89□□□□□ -0.51
SYPL1-201ENST00000011473 RIMKLBQ9ULI2 386 aa11.89□□□□□ -0.51
SYPL1-201ENST00000011473 FAM237BA0A1B0GVD1 139 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 LMO7DNF2Z398 122 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 CHUKO15111 745 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 SIGLEC6O43699 453 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 VEGFDO43915 354 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 CBFA2T3O75081 653 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 RHOXF2BP0C7M4 288 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 PBLDP30039 288 aaPredicted RBP11.88□□□□□ -0.51
SYPL1-201ENST00000011473 ACTR1BP42025 376 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 ACTR1AP61163 376 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 ILF3Q12906 894 aaKnown RBP eCLIP11.88□□□□□ -0.51
SYPL1-201ENST00000011473 GPR33Q49SQ1 333 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 FASTKD1Q53R41 847 aaKnown RBP11.88□□□□□ -0.51
SYPL1-201ENST00000011473 DNAJC21Q5F1R6 531 aaKnown RBP11.88□□□□□ -0.51
SYPL1-201ENST00000011473 TMEM220Q6QAJ8 160 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 CAPN12Q6ZSI9 719 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 ZBED8Q8IZ13 594 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 FAM46DQ8NEK8 389 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 ART4Q93070 314 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 EBNA1BP2Q99848 306 aaKnown RBP11.88□□□□□ -0.51
SYPL1-201ENST00000011473 RHOXF2Q9BQY4 288 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 DPEP2Q9H4A9 486 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 PLAC1Q9HBJ0 212 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 CATSPERZQ9NTU4 200 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 TRNAU1APQ9NX07 287 aaKnown RBP11.88□□□□□ -0.51
SYPL1-201ENST00000011473 PCDHGB2Q9Y5G2 931 aa11.88□□□□□ -0.51
SYPL1-201ENST00000011473 NEMP2A6NFY4 417 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 CD3EAPO15446 510 aaKnown RBP11.87□□□□□ -0.51
SYPL1-201ENST00000011473 SGTAO43765 313 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 USP1O94782 785 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 EML2O95834 649 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 PGAM1P18669 254 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 DNAJC3Q13217 504 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 GTF2H3Q13889 308 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 CRYMQ14894 314 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 SEPT7Q16181 437 aaKnown RBP11.87□□□□□ -0.51
SYPL1-201ENST00000011473 INSCQ1MX18 579 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 C11orf96Q7Z7L8 435 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 PIP4P1Q86T03 277 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 LRRTM4Q86VH4 590 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 CCDC25Q86WR0 208 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 BBOF1Q8ND07 529 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 FBXO36Q8NEA4 188 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 OR4C6Q8NH72 309 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 PATE1Q8WXA2 126 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 IFT81Q8WYA0 676 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 ULK4Q96C45 1275 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 DCUN1D1Q96GG9 259 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 OSGEPL1Q9H4B0 414 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 KLC4Q9NSK0 619 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 SPATS2LQ9NUQ6 558 aaKnown RBP11.87□□□□□ -0.51
SYPL1-201ENST00000011473 ZDHHC3Q9NYG2 299 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 TEX264Q9Y6I9 313 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 PRSS21Q9Y6M0 314 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 ASCC3Q8N3C0 2202 aaKnown RBP11.87□□□□□ -0.51
SYPL1-201ENST00000011473 ZNF106Q9H2Y7 1883 aaKnown RBP11.87□□□□□ -0.51
SYPL1-201ENST00000011473 CABIN1Q9Y6J0 2220 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 SPAARA0A1B0GVQ0 90 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 MAGEB16A2A368 324 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 B4DGG1 531 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 SMAPO00193 183 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 SNX2O60749 519 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 POLBP06746 335 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 ANXA6P08133 673 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 NOVA1P51513 510 aaKnown RBP11.87□□□□□ -0.51
SYPL1-201ENST00000011473 CCDC157Q569K6 752 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 KIAA0930Q6ICG6 404 aaPredicted RBP11.87□□□□□ -0.51
SYPL1-201ENST00000011473 DENND6AQ8IWF6 608 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 FSTL5Q8N475 847 aaPredicted RBP11.87□□□□□ -0.51
SYPL1-201ENST00000011473 GPBAR1Q8TDU6 330 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 APOLD1Q96LR9 279 aa11.87□□□□□ -0.51
SYPL1-201ENST00000011473 ZCCHC2Q9C0B9 1178 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms