RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 RTL5Q5HYW3 569 aaPredicted RBP21.4■■□□□ 1.02
PHGDH-229ENST00000641891 SIRT2Q8IXJ6 389 aa21.4■■□□□ 1.02
PHGDH-229ENST00000641891 LTV1Q96GA3 475 aaPredicted RBP21.4■■□□□ 1.02
PHGDH-229ENST00000641891 KIAA0232Q92628 1395 aa21.4■■□□□ 1.02
PHGDH-229ENST00000641891 NWD1Q149M9 1564 aa21.39■■□□□ 1.02
PHGDH-229ENST00000641891 RGS12O14924 1447 aa21.39■■□□□ 1.01
PHGDH-229ENST00000641891 RTF1Q92541 710 aaKnown RBP21.38■■□□□ 1.01
PHGDH-229ENST00000641891 CHD1LQ86WJ1 897 aa21.37■■□□□ 1.01
PHGDH-229ENST00000641891 CHMP4BQ9H444 224 aaKnown RBP21.37■■□□□ 1.01
PHGDH-229ENST00000641891 TBC1D32Q96NH3 1257 aa21.36■■□□□ 1.01
PHGDH-229ENST00000641891 TSPYL4Q9UJ04 414 aa21.36■■□□□ 1.01
PHGDH-229ENST00000641891 GAS2L2Q8NHY3 880 aa21.36■■□□□ 1.01
PHGDH-229ENST00000641891 ADGRL3Q9HAR2 1447 aa21.35■■□□□ 1.01
PHGDH-229ENST00000641891 DEKP35659 375 aaKnown RBP21.35■■□□□ 1.01
PHGDH-229ENST00000641891 UPF2Q9HAU5 1272 aaKnown RBP21.35■■□□□ 1.01
PHGDH-229ENST00000641891 LTN1O94822 1766 aa21.34■■□□□ 1.01
PHGDH-229ENST00000641891 ESCO1Q5FWF5 840 aa21.34■■□□□ 1.01
PHGDH-229ENST00000641891 ANKRD45Q5TZF3 282 aa21.34■■□□□ 1.01
PHGDH-229ENST00000641891 USHBP1Q8N6Y0 703 aa21.34■■□□□ 1.01
PHGDH-229ENST00000641891 KIF24Q5T7B8 1368 aa21.34■■□□□ 1.01
PHGDH-229ENST00000641891 INTS3Q68E01 1043 aaKnown RBP21.33■■□□□ 1.01
PHGDH-229ENST00000641891 LRRC37A3O60309 1634 aa21.33■■□□□ 1
PHGDH-229ENST00000641891 NPHP4O75161 1426 aaPredicted RBP21.33■■□□□ 1
PHGDH-229ENST00000641891 HAP1P54257 671 aaPredicted RBP21.33■■□□□ 1
PHGDH-229ENST00000641891 GCC1Q96CN9 775 aa21.33■■□□□ 1
PHGDH-229ENST00000641891 SLC4A2P04920 1241 aa21.31■■□□□ 1
PHGDH-229ENST00000641891 MFAP1P55081 439 aaKnown RBP21.31■■□□□ 1
PHGDH-229ENST00000641891 NFAT5O94916 1531 aa21.31■■□□□ 1
PHGDH-229ENST00000641891 MSH6P52701 1360 aa21.31■■□□□ 1
PHGDH-229ENST00000641891 PSME1Q06323 249 aa21.3■■□□□ 1
PHGDH-229ENST00000641891 GNAT3A8MTJ3 354 aa21.3■■□□□ 1
PHGDH-229ENST00000641891 G2E3Q7L622 706 aa21.3■■□□□ 1
PHGDH-229ENST00000641891 RTL1A6NKG5 1358 aa21.29■■□□□ 1
PHGDH-229ENST00000641891 ZBTB7CA1YPR0 619 aa21.29■■□□□ 1
PHGDH-229ENST00000641891 PTPRCP08575 1304 aa21.29■■□□□ 1
PHGDH-229ENST00000641891 SETD1BQ9UPS6 1966 aaKnown RBP21.29■■□□□ 1
PHGDH-229ENST00000641891 XPCQ01831 940 aaPredicted RBP21.28■■□□□ 1
PHGDH-229ENST00000641891 ORAI2Q96SN7 254 aa21.28■■□□□ 1
PHGDH-229ENST00000641891 MAP3K5Q99683 1374 aa21.28■■□□□ 1
PHGDH-229ENST00000641891 ATP10DQ9P241 1426 aa21.27■■□□□ 1
PHGDH-229ENST00000641891 PLEKHG5O94827 1062 aa21.27■■□□□ 1
PHGDH-229ENST00000641891 IL17REQ8NFR9 667 aa21.27■■□□□ 1
PHGDH-229ENST00000641891 HTATSF1O43719 755 aaKnown RBP21.27■■□□□ 1
PHGDH-229ENST00000641891 NFKBIBQ15653 356 aa21.27■■□□□ 1
PHGDH-229ENST00000641891 IP6K1Q92551 441 aa21.26■□□□□ 0.99
PHGDH-229ENST00000641891 MEIS3Q99687 375 aa21.26■□□□□ 0.99
PHGDH-229ENST00000641891 F6X3S4 739 aa21.26■□□□□ 0.99
PHGDH-229ENST00000641891 BECN1Q14457 450 aa21.26■□□□□ 0.99
PHGDH-229ENST00000641891 C22orf23Q9BZE7 217 aa21.26■□□□□ 0.99
PHGDH-229ENST00000641891 USP35Q9P2H5 1018 aa21.26■□□□□ 0.99
PHGDH-229ENST00000641891 NBPF6Q5VWK0 638 aa21.24■□□□□ 0.99
PHGDH-229ENST00000641891 NBPF4Q96M43 638 aa21.24■□□□□ 0.99
PHGDH-229ENST00000641891 NECTIN2Q92692 538 aa21.24■□□□□ 0.99
PHGDH-229ENST00000641891 BMP2KLQ5H9B9 411 aa21.23■□□□□ 0.99
PHGDH-229ENST00000641891 ANKRD44Q8N8A2 993 aa21.23■□□□□ 0.99
PHGDH-229ENST00000641891 BCL11AQ9H165 835 aa21.23■□□□□ 0.99
PHGDH-229ENST00000641891 RGPD2P0DJD1 1756 aa21.23■□□□□ 0.99
PHGDH-229ENST00000641891 CEP85Q6P2H3 762 aa21.23■□□□□ 0.99
PHGDH-229ENST00000641891 SLC4A10Q6U841 1118 aa21.23■□□□□ 0.99
PHGDH-229ENST00000641891 TBC1D2Q9BYX2 928 aa21.23■□□□□ 0.99
PHGDH-229ENST00000641891 FAM208AQ9UK61 1670 aaKnown RBP21.23■□□□□ 0.99
PHGDH-229ENST00000641891 DCTPP1Q9H773 170 aa21.22■□□□□ 0.99
PHGDH-229ENST00000641891 LRRC59Q96AG4 307 aaKnown RBP21.21■□□□□ 0.99
PHGDH-229ENST00000641891 KCNH5Q8NCM2 988 aa21.2■□□□□ 0.98
PHGDH-229ENST00000641891 SLKQ9H2G2 1235 aaPredicted RBP21.2■□□□□ 0.98
PHGDH-229ENST00000641891 TAF7Q15545 349 aaPredicted RBP21.19■□□□□ 0.98
PHGDH-229ENST00000641891 STK31Q9BXU1 1019 aa21.19■□□□□ 0.98
PHGDH-229ENST00000641891 LMOD2Q6P5Q4 547 aa21.19■□□□□ 0.98
PHGDH-229ENST00000641891 RPAP2Q8IXW5 612 aaPredicted RBP21.18■□□□□ 0.98
PHGDH-229ENST00000641891 C16orf71Q8IYS4 520 aaPredicted RBP21.18■□□□□ 0.98
PHGDH-229ENST00000641891 PHRF1Q9P1Y6 1649 aaKnown RBP21.18■□□□□ 0.98
PHGDH-229ENST00000641891 PROSER2Q86WR7 435 aaPredicted RBP21.17■□□□□ 0.98
PHGDH-229ENST00000641891 FRAT2O75474 233 aaPredicted RBP21.17■□□□□ 0.98
PHGDH-229ENST00000641891 GCP02774 474 aa21.17■□□□□ 0.98
PHGDH-229ENST00000641891 FLIIQ13045 1269 aa21.17■□□□□ 0.98
PHGDH-229ENST00000641891 CCDC30Q5VVM6 783 aa21.17■□□□□ 0.98
PHGDH-229ENST00000641891 PLEKHM2Q8IWE5 1019 aa21.17■□□□□ 0.98
PHGDH-229ENST00000641891 APBB1O00213 710 aa21.16■□□□□ 0.98
PHGDH-229ENST00000641891 LGR6Q9HBX8 967 aa21.16■□□□□ 0.98
PHGDH-229ENST00000641891 SLIT3O75094 1523 aa21.16■□□□□ 0.98
PHGDH-229ENST00000641891 GSPT1P15170 499 aaKnown RBP21.16■□□□□ 0.98
PHGDH-229ENST00000641891 CCT4P50991 539 aaKnown RBP21.16■□□□□ 0.98
PHGDH-229ENST00000641891 TRPM3Q9HCF6 1732 aaPredicted RBP21.15■□□□□ 0.98
PHGDH-229ENST00000641891 CEMIPQ8WUJ3 1361 aa21.15■□□□□ 0.98
PHGDH-229ENST00000641891 SMARCA5O60264 1052 aaPredicted RBP21.15■□□□□ 0.98
PHGDH-229ENST00000641891 FKBP5Q13451 457 aaPredicted RBP21.15■□□□□ 0.98
PHGDH-229ENST00000641891 TBC1D9Q6ZT07 1266 aa21.15■□□□□ 0.98
PHGDH-229ENST00000641891 OTUD7AQ8TE49 926 aaPredicted RBP21.15■□□□□ 0.98
PHGDH-229ENST00000641891 ARHGEF25Q86VW2 580 aa21.14■□□□□ 0.98
PHGDH-229ENST00000641891 SPRYD3Q8NCJ5 442 aa21.14■□□□□ 0.97
PHGDH-229ENST00000641891 ANTXR1Q9H6X2 564 aa21.14■□□□□ 0.97
PHGDH-229ENST00000641891 MED1Q15648 1581 aaPredicted RBP21.13■□□□□ 0.97
PHGDH-229ENST00000641891 BABAM1Q9NWV8 329 aa21.13■□□□□ 0.97
PHGDH-229ENST00000641891 C1orf167Q5SNV9 1468 aa21.13■□□□□ 0.97
PHGDH-229ENST00000641891 RBM25P49756 843 aaKnown RBP21.12■□□□□ 0.97
PHGDH-229ENST00000641891 KRT28Q7Z3Y7 464 aa21.12■□□□□ 0.97
PHGDH-229ENST00000641891 ZNF530Q6P9A1 599 aaPredicted RBP21.11■□□□□ 0.97
PHGDH-229ENST00000641891 LMO7Q8WWI1 1683 aa21.11■□□□□ 0.97
PHGDH-229ENST00000641891 PXDNQ92626 1479 aa21.1■□□□□ 0.97
PHGDH-229ENST00000641891 HDGFL1Q5TGJ6 251 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms