RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 KCNH5Q8NCM2 988 aa10.61□□□□□ -0.71
PHGDH-225ENST00000641720 L3MBTL2Q969R5 705 aa10.61□□□□□ -0.71
PHGDH-225ENST00000641720 MEGF6O75095 1541 aa10.61□□□□□ -0.71
PHGDH-225ENST00000641720 SBF1O95248 1867 aa10.6□□□□□ -0.71
PHGDH-225ENST00000641720 ANKRD26Q9UPS8 1709 aa10.6□□□□□ -0.71
PHGDH-225ENST00000641720 TONSLQ96HA7 1378 aa10.6□□□□□ -0.71
PHGDH-225ENST00000641720 ANKRD36BQ8N2N9 1353 aa10.59□□□□□ -0.71
PHGDH-225ENST00000641720 IL2RBP14784 551 aa10.58□□□□□ -0.72
PHGDH-225ENST00000641720 KCNQ4P56696 695 aa10.58□□□□□ -0.72
PHGDH-225ENST00000641720 GPR162Q16538 588 aa10.58□□□□□ -0.72
PHGDH-225ENST00000641720 SLC27A3Q5K4L6 730 aa10.58□□□□□ -0.72
PHGDH-225ENST00000641720 KIF20BQ96Q89 1820 aa10.58□□□□□ -0.72
PHGDH-225ENST00000641720 COL5A3P25940 1745 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-225ENST00000641720 KTN1Q86UP2 1357 aaKnown RBP10.57□□□□□ -0.72
PHGDH-225ENST00000641720 ZNF692Q9BU19 519 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-225ENST00000641720 C4AP0C0L4 1744 aa10.56□□□□□ -0.72
PHGDH-225ENST00000641720 SOX12O15370 315 aa10.56□□□□□ -0.72
PHGDH-225ENST00000641720 CSB-PGBD3P0DP91 1061 aa10.56□□□□□ -0.72
PHGDH-225ENST00000641720 NME9Q86XW9 330 aa10.56□□□□□ -0.72
PHGDH-225ENST00000641720 ZNF831Q5JPB2 1677 aa10.56□□□□□ -0.72
PHGDH-225ENST00000641720 EVC2Q86UK5 1308 aa10.56□□□□□ -0.72
PHGDH-225ENST00000641720 MYH14Q7Z406 1995 aaKnown RBP10.56□□□□□ -0.72
PHGDH-225ENST00000641720 AMIGO3Q86WK7 504 aa10.55□□□□□ -0.72
PHGDH-225ENST00000641720 COL23A1Q86Y22 540 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-225ENST00000641720 EDC4Q6P2E9 1401 aaKnown RBP10.55□□□□□ -0.72
PHGDH-225ENST00000641720 HSPA6P17066 643 aa10.54□□□□□ -0.72
PHGDH-225ENST00000641720 ANKRD24Q8TF21 1146 aa10.54□□□□□ -0.72
PHGDH-225ENST00000641720 A0A1W2PP64 1363 aa10.53□□□□□ -0.72
PHGDH-225ENST00000641720 CCDC88AQ3V6T2 1871 aa10.53□□□□□ -0.72
PHGDH-225ENST00000641720 KIF3CO14782 793 aa10.53□□□□□ -0.72
PHGDH-225ENST00000641720 NCAPD2Q15021 1401 aa10.52□□□□□ -0.73
PHGDH-225ENST00000641720 VIRMAQ69YN4 1812 aaKnown RBP10.52□□□□□ -0.73
PHGDH-225ENST00000641720 POLD1P28340 1107 aa10.52□□□□□ -0.73
PHGDH-225ENST00000641720 NLRP2Q9NX02 1062 aa10.52□□□□□ -0.73
PHGDH-225ENST00000641720 ADAMTS7Q9UKP4 1686 aa10.52□□□□□ -0.73
PHGDH-225ENST00000641720 GRIN3BO60391 1043 aa10.51□□□□□ -0.73
PHGDH-225ENST00000641720 DNAJC5GQ8N7S2 189 aa10.51□□□□□ -0.73
PHGDH-225ENST00000641720 TNRC6CQ9HCJ0 1690 aaKnown RBP10.5□□□□□ -0.73
PHGDH-225ENST00000641720 PRIM1P49642 420 aaKnown RBP10.5□□□□□ -0.73
PHGDH-225ENST00000641720 PELP1Q8IZL8 1130 aaKnown RBP10.5□□□□□ -0.73
PHGDH-225ENST00000641720 KLHL34Q8N239 644 aa10.5□□□□□ -0.73
PHGDH-225ENST00000641720 IP6K1Q92551 441 aa10.5□□□□□ -0.73
PHGDH-225ENST00000641720 TFCP2L1Q9NZI6 479 aa10.5□□□□□ -0.73
PHGDH-225ENST00000641720 CD2APQ9Y5K6 639 aa10.5□□□□□ -0.73
PHGDH-225ENST00000641720 DLEC1Q9Y238 1755 aa10.49□□□□□ -0.73
PHGDH-225ENST00000641720 PXDNLA1KZ92 1463 aa10.49□□□□□ -0.73
PHGDH-225ENST00000641720 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.49□□□□□ -0.73
PHGDH-225ENST00000641720 TIMELESSQ9UNS1 1208 aa10.49□□□□□ -0.73
PHGDH-225ENST00000641720 ROCK2O75116 1388 aaKnown RBP10.49□□□□□ -0.73
PHGDH-225ENST00000641720 MSL1Q68DK7 614 aa10.48□□□□□ -0.73
PHGDH-225ENST00000641720 MAP3K19Q56UN5 1328 aa10.48□□□□□ -0.73
PHGDH-225ENST00000641720 AFDNP55196 1824 aaKnown RBP10.47□□□□□ -0.73
PHGDH-225ENST00000641720 DDX54Q8TDD1 881 aaKnown RBP10.47□□□□□ -0.73
PHGDH-225ENST00000641720 GPBP1L1Q9HC44 474 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-225ENST00000641720 CCNL1Q9UK58 526 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-225ENST00000641720 RTL1A6NKG5 1358 aa10.47□□□□□ -0.73
PHGDH-225ENST00000641720 FBLN1P23142 703 aa10.46□□□□□ -0.73
PHGDH-225ENST00000641720 HOXC9P31274 260 aa10.46□□□□□ -0.73
PHGDH-225ENST00000641720 SLC12A5Q9H2X9 1139 aa10.46□□□□□ -0.73
PHGDH-225ENST00000641720 IGSF1Q8N6C5 1336 aa10.46□□□□□ -0.73
PHGDH-225ENST00000641720 DICER1Q9UPY3 1922 aaKnown RBP10.46□□□□□ -0.74
PHGDH-225ENST00000641720 TJP1Q07157 1748 aa10.45□□□□□ -0.74
PHGDH-225ENST00000641720 NSD3Q9BZ95 1437 aa10.45□□□□□ -0.74
PHGDH-225ENST00000641720 PALLDQ8WX93 1383 aa10.45□□□□□ -0.74
PHGDH-225ENST00000641720 USP47Q96K76 1375 aa10.45□□□□□ -0.74
PHGDH-225ENST00000641720 TIAM2Q8IVF5 1701 aa10.44□□□□□ -0.74
PHGDH-225ENST00000641720 NRXN2Q9P2S2 1712 aa10.44□□□□□ -0.74
PHGDH-225ENST00000641720 C10orf71Q711Q0 1435 aa10.44□□□□□ -0.74
PHGDH-225ENST00000641720 NBPF6Q5VWK0 638 aa10.44□□□□□ -0.74
PHGDH-225ENST00000641720 SMIM5Q71RC9 77 aa10.44□□□□□ -0.74
PHGDH-225ENST00000641720 ZCRB1Q8TBF4 217 aaKnown RBP10.44□□□□□ -0.74
PHGDH-225ENST00000641720 NBPF4Q96M43 638 aa10.44□□□□□ -0.74
PHGDH-225ENST00000641720 ZNF526Q8TF50 670 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-225ENST00000641720 KDRP35968 1356 aa10.42□□□□□ -0.74
PHGDH-225ENST00000641720 CYP27B1O15528 508 aa10.42□□□□□ -0.74
PHGDH-225ENST00000641720 SYTL4Q96C24 671 aaPredicted RBP10.42□□□□□ -0.74
PHGDH-225ENST00000641720 CARD11Q9BXL7 1154 aa10.42□□□□□ -0.74
PHGDH-225ENST00000641720 JMYQ8N9B5 988 aa10.41□□□□□ -0.74
PHGDH-225ENST00000641720 LTV1Q96GA3 475 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-225ENST00000641720 PUS7Q96PZ0 661 aaKnown RBP10.41□□□□□ -0.74
PHGDH-225ENST00000641720 TESK2Q96S53 571 aa10.41□□□□□ -0.74
PHGDH-225ENST00000641720 CGNL1Q0VF96 1302 aa10.4□□□□□ -0.74
PHGDH-225ENST00000641720 SCN11AQ9UI33 1791 aa10.4□□□□□ -0.74
PHGDH-225ENST00000641720 APLP1P51693 650 aa10.4□□□□□ -0.74
PHGDH-225ENST00000641720 USHBP1Q8N6Y0 703 aa10.4□□□□□ -0.74
PHGDH-225ENST00000641720 LINC00116Q8NCU8 138 aa10.4□□□□□ -0.74
PHGDH-225ENST00000641720 INSRP06213 1382 aa10.39□□□□□ -0.75
PHGDH-225ENST00000641720 ANKRD31Q8N7Z5 1873 aa10.39□□□□□ -0.75
PHGDH-225ENST00000641720 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.39□□□□□ -0.75
PHGDH-225ENST00000641720 FLAD1Q8NFF5 587 aa10.39□□□□□ -0.75
PHGDH-225ENST00000641720 WWC3Q9ULE0 1092 aa10.39□□□□□ -0.75
PHGDH-225ENST00000641720 FER1L6Q2WGJ9 1857 aa10.38□□□□□ -0.75
PHGDH-225ENST00000641720 TOMM70O94826 608 aa10.38□□□□□ -0.75
PHGDH-225ENST00000641720 ITPK1Q13572 414 aa10.38□□□□□ -0.75
PHGDH-225ENST00000641720 NKX1-1Q15270 411 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-225ENST00000641720 COL13A1Q5TAT6 717 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-225ENST00000641720 NMRK2Q9NPI5 230 aa10.38□□□□□ -0.75
PHGDH-225ENST00000641720 KCPQ6ZWJ8 1503 aa10.38□□□□□ -0.75
PHGDH-225ENST00000641720 PCDH11XQ9BZA7 1347 aa10.37□□□□□ -0.75
PHGDH-225ENST00000641720 PCDH11YQ9BZA8 1340 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms