RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 LY75O60449 1722 aa11.32□□□□□ -0.6
PHGDH-217ENST00000641455 KTN1Q86UP2 1357 aaKnown RBP11.32□□□□□ -0.6
PHGDH-217ENST00000641455 IGSF1Q8N6C5 1336 aa11.32□□□□□ -0.6
PHGDH-217ENST00000641455 ANKRD36BQ8N2N9 1353 aa11.31□□□□□ -0.6
PHGDH-217ENST00000641455 LTV1Q96GA3 475 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-217ENST00000641455 USP47Q96K76 1375 aa11.3□□□□□ -0.6
PHGDH-217ENST00000641455 COL13A1Q5TAT6 717 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-217ENST00000641455 NME9Q86XW9 330 aa11.29□□□□□ -0.6
PHGDH-217ENST00000641455 TNS4Q8IZW8 715 aa11.29□□□□□ -0.6
PHGDH-217ENST00000641455 NSD2O96028 1365 aa11.28□□□□□ -0.6
PHGDH-217ENST00000641455 TOMM70O94826 608 aa11.28□□□□□ -0.6
PHGDH-217ENST00000641455 DNAJC5GQ8N7S2 189 aa11.28□□□□□ -0.6
PHGDH-217ENST00000641455 C5P01031 1676 aa11.27□□□□□ -0.6
PHGDH-217ENST00000641455 MON2Q7Z3U7 1717 aa11.27□□□□□ -0.61
PHGDH-217ENST00000641455 WDR90Q96KV7 1748 aa11.27□□□□□ -0.61
PHGDH-217ENST00000641455 FLAD1Q8NFF5 587 aa11.27□□□□□ -0.61
PHGDH-217ENST00000641455 USP31Q70CQ4 1352 aa11.27□□□□□ -0.61
PHGDH-217ENST00000641455 PHF14O94880 888 aa11.26□□□□□ -0.61
PHGDH-217ENST00000641455 HTRA3P83110 453 aa11.26□□□□□ -0.61
PHGDH-217ENST00000641455 C16orf71Q8IYS4 520 aaPredicted RBP11.26□□□□□ -0.61
PHGDH-217ENST00000641455 ZCRB1Q8TBF4 217 aaKnown RBP11.26□□□□□ -0.61
PHGDH-217ENST00000641455 FAM208AQ9UK61 1670 aaKnown RBP11.26□□□□□ -0.61
PHGDH-217ENST00000641455 PRELPP51888 382 aa11.25□□□□□ -0.61
PHGDH-217ENST00000641455 KLRG1Q96E93 195 aa11.25□□□□□ -0.61
PHGDH-217ENST00000641455 AK7Q96M32 723 aa11.25□□□□□ -0.61
PHGDH-217ENST00000641455 USP54Q70EL1 1684 aa11.24□□□□□ -0.61
PHGDH-217ENST00000641455 TMC1Q8TDI8 760 aa11.24□□□□□ -0.61
PHGDH-217ENST00000641455 NMRK2Q9NPI5 230 aa11.24□□□□□ -0.61
PHGDH-217ENST00000641455 HMGB2P26583 209 aaKnown RBP11.23□□□□□ -0.61
PHGDH-217ENST00000641455 IP6K1Q92551 441 aa11.23□□□□□ -0.61
PHGDH-217ENST00000641455 MEGF6O75095 1541 aa11.22□□□□□ -0.61
PHGDH-217ENST00000641455 ARHGAP27Q6ZUM4 889 aa11.22□□□□□ -0.61
PHGDH-217ENST00000641455 HDGFL2Q7Z4V5 671 aaPredicted RBP11.22□□□□□ -0.61
PHGDH-217ENST00000641455 TAF1LQ8IZX4 1826 aa11.22□□□□□ -0.61
PHGDH-217ENST00000641455 PALLDQ8WX93 1383 aa11.22□□□□□ -0.61
PHGDH-217ENST00000641455 CICQ96RK0 1608 aaPredicted RBP11.22□□□□□ -0.61
PHGDH-217ENST00000641455 BCS1LQ9Y276 419 aa11.22□□□□□ -0.61
PHGDH-217ENST00000641455 RGPD2P0DJD1 1756 aa11.21□□□□□ -0.61
PHGDH-217ENST00000641455 SBNO2Q9Y2G9 1366 aa11.21□□□□□ -0.61
PHGDH-217ENST00000641455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.21□□□□□ -0.61
PHGDH-217ENST00000641455 AMPHP49418 695 aa11.21□□□□□ -0.61
PHGDH-217ENST00000641455 SMIM5Q71RC9 77 aa11.21□□□□□ -0.61
PHGDH-217ENST00000641455 JMYQ8N9B5 988 aa11.21□□□□□ -0.61
PHGDH-217ENST00000641455 RBM46Q8TBY0 533 aaKnown RBP11.21□□□□□ -0.61
PHGDH-217ENST00000641455 C4BP0C0L5 1744 aa11.21□□□□□ -0.62
PHGDH-217ENST00000641455 NSD3Q9BZ95 1437 aa11.2□□□□□ -0.62
PHGDH-217ENST00000641455 ROCK2O75116 1388 aaKnown RBP11.2□□□□□ -0.62
PHGDH-217ENST00000641455 MPRIPQ6WCQ1 1025 aa11.2□□□□□ -0.62
PHGDH-217ENST00000641455 EDC4Q6P2E9 1401 aaKnown RBP11.19□□□□□ -0.62
PHGDH-217ENST00000641455 TOGARAM1Q9Y4F4 1720 aa11.19□□□□□ -0.62
PHGDH-217ENST00000641455 AMIGO3Q86WK7 504 aa11.19□□□□□ -0.62
PHGDH-217ENST00000641455 RAPGEF4Q8WZA2 1011 aa11.19□□□□□ -0.62
PHGDH-217ENST00000641455 UBR3Q6ZT12 1888 aa11.19□□□□□ -0.62
PHGDH-217ENST00000641455 HOXC9P31274 260 aa11.18□□□□□ -0.62
PHGDH-217ENST00000641455 FSTL1Q12841 308 aa11.18□□□□□ -0.62
PHGDH-217ENST00000641455 USHBP1Q8N6Y0 703 aa11.18□□□□□ -0.62
PHGDH-217ENST00000641455 N4BP2Q86UW6 1770 aaPredicted RBP11.18□□□□□ -0.62
PHGDH-217ENST00000641455 PXDNLA1KZ92 1463 aa11.18□□□□□ -0.62
PHGDH-217ENST00000641455 CD163L1Q9NR16 1453 aa11.18□□□□□ -0.62
PHGDH-217ENST00000641455 MAP3K19Q56UN5 1328 aa11.17□□□□□ -0.62
PHGDH-217ENST00000641455 FCHSD2O94868 740 aa11.17□□□□□ -0.62
PHGDH-217ENST00000641455 MMP10P09238 476 aa11.17□□□□□ -0.62
PHGDH-217ENST00000641455 TATP17735 454 aaPredicted RBP11.17□□□□□ -0.62
PHGDH-217ENST00000641455 SSFA2P28290 1259 aa11.17□□□□□ -0.62
PHGDH-217ENST00000641455 SMARCC1Q92922 1105 aaPredicted RBP11.17□□□□□ -0.62
PHGDH-217ENST00000641455 SLC12A5Q9H2X9 1139 aa11.17□□□□□ -0.62
PHGDH-217ENST00000641455 TERF2IPQ9NYB0 399 aa11.17□□□□□ -0.62
PHGDH-217ENST00000641455 PCDH11XQ9BZA7 1347 aa11.16□□□□□ -0.62
PHGDH-217ENST00000641455 PCDH11YQ9BZA8 1340 aa11.16□□□□□ -0.62
PHGDH-217ENST00000641455 A0A0G2JLW4 131 aa11.16□□□□□ -0.62
PHGDH-217ENST00000641455 GNPATO15228 680 aa11.16□□□□□ -0.62
PHGDH-217ENST00000641455 HSPA1AP0DMV8 641 aaKnown RBP11.16□□□□□ -0.62
PHGDH-217ENST00000641455 HSPA1BP0DMV9 641 aaKnown RBP11.16□□□□□ -0.62
PHGDH-217ENST00000641455 C9orf131Q5VYM1 1079 aa11.16□□□□□ -0.62
PHGDH-217ENST00000641455 COG3Q96JB2 828 aa11.16□□□□□ -0.62
PHGDH-217ENST00000641455 PLEKHG2Q9H7P9 1386 aa11.16□□□□□ -0.62
PHGDH-217ENST00000641455 KCPQ6ZWJ8 1503 aa11.15□□□□□ -0.62
PHGDH-217ENST00000641455 CGNL1Q0VF96 1302 aa11.15□□□□□ -0.62
PHGDH-217ENST00000641455 KDM2BQ8NHM5 1336 aa11.15□□□□□ -0.62
PHGDH-217ENST00000641455 FBLN1P23142 703 aa11.15□□□□□ -0.62
PHGDH-217ENST00000641455 NBPF6Q5VWK0 638 aa11.15□□□□□ -0.62
PHGDH-217ENST00000641455 L3MBTL2Q969R5 705 aa11.15□□□□□ -0.62
PHGDH-217ENST00000641455 NBPF4Q96M43 638 aa11.15□□□□□ -0.62
PHGDH-217ENST00000641455 SMG6Q86US8 1419 aaKnown RBP11.15□□□□□ -0.62
PHGDH-217ENST00000641455 A0A1W2PP64 1363 aa11.15□□□□□ -0.63
PHGDH-217ENST00000641455 TGFB2P61812 414 aa11.14□□□□□ -0.63
PHGDH-217ENST00000641455 LINC00116Q8NCU8 138 aa11.14□□□□□ -0.63
PHGDH-217ENST00000641455 RRAGCQ9HB90 399 aa11.14□□□□□ -0.63
PHGDH-217ENST00000641455 ITGB4P16144 1822 aa11.14□□□□□ -0.63
PHGDH-217ENST00000641455 PKD1L3Q7Z443 1732 aa11.13□□□□□ -0.63
PHGDH-217ENST00000641455 KIAA1551Q9HCM1 1747 aa11.13□□□□□ -0.63
PHGDH-217ENST00000641455 DPEP1P16444 411 aa11.13□□□□□ -0.63
PHGDH-217ENST00000641455 SMC1BQ8NDV3 1235 aa11.13□□□□□ -0.63
PHGDH-217ENST00000641455 CCDC87Q9NVE4 849 aa11.13□□□□□ -0.63
PHGDH-217ENST00000641455 RNF181Q9P0P0 153 aa11.13□□□□□ -0.63
PHGDH-217ENST00000641455 KIF13BQ9NQT8 1826 aa11.13□□□□□ -0.63
PHGDH-217ENST00000641455 LOC102724428A0A0B4J2F2 783 aa11.12□□□□□ -0.63
PHGDH-217ENST00000641455 SIK1P57059 783 aa11.12□□□□□ -0.63
PHGDH-217ENST00000641455 RRS1Q15050 365 aaKnown RBP11.12□□□□□ -0.63
PHGDH-217ENST00000641455 RTL1A6NKG5 1358 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms