RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 ZMYND15Q9H091 742 aa16.87■□□□□ 0.29
PAX6-280ENST00000640872 MSNP26038 577 aaKnown RBP16.86■□□□□ 0.29
PAX6-280ENST00000640872 TERF1P54274 439 aa16.86■□□□□ 0.29
PAX6-280ENST00000640872 INTS3Q68E01 1043 aaKnown RBP16.86■□□□□ 0.29
PAX6-280ENST00000640872 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.86■□□□□ 0.29
PAX6-280ENST00000640872 CWC22Q9HCG8 908 aaKnown RBP16.86■□□□□ 0.29
PAX6-280ENST00000640872 IL13P35225 146 aa16.86■□□□□ 0.29
PAX6-280ENST00000640872 RBSNQ9H1K0 784 aa16.86■□□□□ 0.29
PAX6-280ENST00000640872 CDK12Q9NYV4 1490 aaPredicted RBP16.85■□□□□ 0.29
PAX6-280ENST00000640872 C16orf71Q8IYS4 520 aaPredicted RBP16.85■□□□□ 0.29
PAX6-280ENST00000640872 PDCL3Q9H2J4 239 aa16.85■□□□□ 0.29
PAX6-280ENST00000640872 RIMS2Q9UQ26 1411 aa16.85■□□□□ 0.29
PAX6-280ENST00000640872 SPATA31D1Q6ZQQ2 1576 aa16.85■□□□□ 0.29
PAX6-280ENST00000640872 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.85■□□□□ 0.29
PAX6-280ENST00000640872 ANKRD44Q8N8A2 993 aa16.84■□□□□ 0.29
PAX6-280ENST00000640872 RGS12O14924 1447 aa16.84■□□□□ 0.29
PAX6-280ENST00000640872 OTUD7AQ8TE49 926 aaPredicted RBP16.84■□□□□ 0.29
PAX6-280ENST00000640872 NOL7Q9UMY1 257 aaKnown RBP16.84■□□□□ 0.29
PAX6-280ENST00000640872 NCLP19338 710 aaKnown RBP16.83■□□□□ 0.28
PAX6-280ENST00000640872 LMOD3Q0VAK6 560 aa16.83■□□□□ 0.28
PAX6-280ENST00000640872 GPT2Q8TD30 523 aa16.83■□□□□ 0.28
PAX6-280ENST00000640872 ZDHHC9Q9Y397 364 aa16.83■□□□□ 0.28
PAX6-280ENST00000640872 EMILIN1Q9Y6C2 1016 aa16.83■□□□□ 0.28
PAX6-280ENST00000640872 CPSF1Q10570 1443 aaKnown RBP16.83■□□□□ 0.28
PAX6-280ENST00000640872 SDSP20132 328 aa16.82■□□□□ 0.28
PAX6-280ENST00000640872 PRIM1P49642 420 aaKnown RBP16.82■□□□□ 0.28
PAX6-280ENST00000640872 ZGPATQ8N5A5 531 aaKnown RBP16.82■□□□□ 0.28
PAX6-280ENST00000640872 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.82■□□□□ 0.28
PAX6-280ENST00000640872 ST18O60284 1047 aa16.82■□□□□ 0.28
PAX6-280ENST00000640872 ZNF500O60304 480 aaPredicted RBP16.82■□□□□ 0.28
PAX6-280ENST00000640872 ESF1Q9H501 851 aaKnown RBP16.82■□□□□ 0.28
PAX6-280ENST00000640872 METP08581 1390 aa16.81■□□□□ 0.28
PAX6-280ENST00000640872 PRPF40AO75400 957 aaKnown RBP16.81■□□□□ 0.28
PAX6-280ENST00000640872 RPAP2Q8IXW5 612 aaPredicted RBP16.81■□□□□ 0.28
PAX6-280ENST00000640872 CEP85Q6P2H3 762 aa16.8■□□□□ 0.28
PAX6-280ENST00000640872 DLC1Q96QB1 1528 aa16.8■□□□□ 0.28
PAX6-280ENST00000640872 RBM27Q9P2N5 1060 aaKnown RBP16.8■□□□□ 0.28
PAX6-280ENST00000640872 AATKQ6ZMQ8 1374 aa16.8■□□□□ 0.28
PAX6-280ENST00000640872 FAM83GA6ND36 823 aa16.79■□□□□ 0.28
PAX6-280ENST00000640872 CASC1Q6TDU7 716 aa16.79■□□□□ 0.28
PAX6-280ENST00000640872 TXNDC2Q86VQ3 553 aa16.79■□□□□ 0.28
PAX6-280ENST00000640872 RTL1A6NKG5 1358 aa16.79■□□□□ 0.28
PAX6-280ENST00000640872 NCKAP5LQ9HCH0 1330 aa16.78■□□□□ 0.28
PAX6-280ENST00000640872 EDC4Q6P2E9 1401 aaKnown RBP16.78■□□□□ 0.28
PAX6-280ENST00000640872 TMEM63CQ9P1W3 806 aa16.78■□□□□ 0.28
PAX6-280ENST00000640872 SMARCA5O60264 1052 aaPredicted RBP16.78■□□□□ 0.28
PAX6-280ENST00000640872 REC8O95072 547 aa16.78■□□□□ 0.28
PAX6-280ENST00000640872 CEBPAP49715 358 aaPredicted RBP16.78■□□□□ 0.28
PAX6-280ENST00000640872 LRSAM1Q6UWE0 723 aa16.78■□□□□ 0.28
PAX6-280ENST00000640872 MSH6P52701 1360 aa16.77■□□□□ 0.28
PAX6-280ENST00000640872 DCTN1Q14203 1278 aa16.77■□□□□ 0.27
PAX6-280ENST00000640872 ZKSCAN5Q9Y2L8 839 aa16.77■□□□□ 0.27
PAX6-280ENST00000640872 PLPPR3Q6T4P5 718 aa16.76■□□□□ 0.27
PAX6-280ENST00000640872 R3HCC1Q9Y3T6 440 aaKnown RBP16.76■□□□□ 0.27
PAX6-280ENST00000640872 SETD1AO15047 1707 aaKnown RBP16.76■□□□□ 0.27
PAX6-280ENST00000640872 NRXN3Q9Y4C0 1643 aa16.76■□□□□ 0.27
PAX6-280ENST00000640872 ERC2O15083 957 aa16.75■□□□□ 0.27
PAX6-280ENST00000640872 NME9Q86XW9 330 aa16.75■□□□□ 0.27
PAX6-280ENST00000640872 NSFL1CQ9UNZ2 370 aaKnown RBP16.75■□□□□ 0.27
PAX6-280ENST00000640872 MCM5P33992 734 aa16.75■□□□□ 0.27
PAX6-280ENST00000640872 CHAMP1Q96JM3 812 aa16.75■□□□□ 0.27
PAX6-280ENST00000640872 XPCQ01831 940 aaPredicted RBP16.74■□□□□ 0.27
PAX6-280ENST00000640872 SYCE3A1L190 88 aa16.74■□□□□ 0.27
PAX6-280ENST00000640872 ZRANB1Q9UGI0 708 aa16.74■□□□□ 0.27
PAX6-280ENST00000640872 NRKQ7Z2Y5 1582 aa16.74■□□□□ 0.27
PAX6-280ENST00000640872 MEIS3Q99687 375 aa16.73■□□□□ 0.27
PAX6-280ENST00000640872 OSBPL3Q9H4L5 887 aa16.73■□□□□ 0.27
PAX6-280ENST00000640872 TNRQ92752 1358 aa16.73■□□□□ 0.27
PAX6-280ENST00000640872 MBD3O95983 291 aa16.73■□□□□ 0.27
PAX6-280ENST00000640872 KRT24Q2M2I5 525 aa16.73■□□□□ 0.27
PAX6-280ENST00000640872 PTPRCP08575 1304 aa16.73■□□□□ 0.27
PAX6-280ENST00000640872 KIAA0232Q92628 1395 aa16.73■□□□□ 0.27
PAX6-280ENST00000640872 APBB1O00213 710 aa16.72■□□□□ 0.27
PAX6-280ENST00000640872 HAP1P54257 671 aaPredicted RBP16.72■□□□□ 0.27
PAX6-280ENST00000640872 MON2Q7Z3U7 1717 aa16.72■□□□□ 0.27
PAX6-280ENST00000640872 CPS1P31327 1500 aa16.72■□□□□ 0.27
PAX6-280ENST00000640872 RBM10P98175 930 aaKnown RBP16.72■□□□□ 0.27
PAX6-280ENST00000640872 TMX3Q96JJ7 454 aa16.72■□□□□ 0.27
PAX6-280ENST00000640872 CCDC39Q9UFE4 941 aa16.72■□□□□ 0.27
PAX6-280ENST00000640872 TUBGCP6Q96RT7 1819 aa16.72■□□□□ 0.27
PAX6-280ENST00000640872 BRD1O95696 1058 aa16.71■□□□□ 0.27
PAX6-280ENST00000640872 CSPP1Q1MSJ5 1256 aa16.71■□□□□ 0.27
PAX6-280ENST00000640872 WASLO00401 505 aaPredicted RBP16.71■□□□□ 0.26
PAX6-280ENST00000640872 CHL1O00533 1208 aa16.71■□□□□ 0.26
PAX6-280ENST00000640872 LTKP29376 864 aa16.71■□□□□ 0.26
PAX6-280ENST00000640872 RRS1Q15050 365 aaKnown RBP16.71■□□□□ 0.26
PAX6-280ENST00000640872 MAP7D2Q96T17 732 aa16.71■□□□□ 0.26
PAX6-280ENST00000640872 PDE1AP54750 535 aa16.7■□□□□ 0.26
PAX6-280ENST00000640872 CUL4AQ13619 759 aa16.7■□□□□ 0.26
PAX6-280ENST00000640872 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.7■□□□□ 0.26
PAX6-280ENST00000640872 UQCRHLA0A096LP55 91 aa16.7■□□□□ 0.26
PAX6-280ENST00000640872 UQCRHP07919 91 aa16.7■□□□□ 0.26
PAX6-280ENST00000640872 MCM2P49736 904 aa16.7■□□□□ 0.26
PAX6-280ENST00000640872 C3P01024 1663 aa16.69■□□□□ 0.26
PAX6-280ENST00000640872 NEK4P51957 841 aa16.69■□□□□ 0.26
PAX6-280ENST00000640872 COG3Q96JB2 828 aa16.69■□□□□ 0.26
PAX6-280ENST00000640872 TMEM2Q9UHN6 1383 aa16.69■□□□□ 0.26
PAX6-280ENST00000640872 HMMRO75330 724 aa16.68■□□□□ 0.26
PAX6-280ENST00000640872 FOXD4L5Q5VV16 416 aaPredicted RBP16.68■□□□□ 0.26
PAX6-280ENST00000640872 FOXD4L4Q8WXT5 416 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms