RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 HSP90AB2PQ58FF8 381 aa20.46■□□□□ 0.87
HNRNPU-228ENST00000640306 AK9Q5TCS8 1911 aa20.46■□□□□ 0.87
HNRNPU-228ENST00000640306 F6X3S4 739 aa20.45■□□□□ 0.86
HNRNPU-228ENST00000640306 SDSP20132 328 aa20.45■□□□□ 0.86
HNRNPU-228ENST00000640306 CEP85Q6P2H3 762 aa20.45■□□□□ 0.86
HNRNPU-228ENST00000640306 MSH6P52701 1360 aa20.44■□□□□ 0.86
HNRNPU-228ENST00000640306 TMEM2Q9UHN6 1383 aa20.44■□□□□ 0.86
HNRNPU-228ENST00000640306 TSHZ3Q63HK5 1081 aa20.44■□□□□ 0.86
HNRNPU-228ENST00000640306 MCTP1Q6DN14 999 aa20.44■□□□□ 0.86
HNRNPU-228ENST00000640306 TRIM44Q96DX7 344 aaPredicted RBP20.44■□□□□ 0.86
HNRNPU-228ENST00000640306 CDK12Q9NYV4 1490 aaPredicted RBP20.44■□□□□ 0.86
HNRNPU-228ENST00000640306 PRR36Q9H6K5 1346 aa20.44■□□□□ 0.86
HNRNPU-228ENST00000640306 FOXO3O43524 673 aa20.44■□□□□ 0.86
HNRNPU-228ENST00000640306 CHAMP1Q96JM3 812 aa20.44■□□□□ 0.86
HNRNPU-228ENST00000640306 BAG4O95429 457 aaKnown RBP20.43■□□□□ 0.86
HNRNPU-228ENST00000640306 SLC4A2P04920 1241 aa20.43■□□□□ 0.86
HNRNPU-228ENST00000640306 ANKRD44Q8N8A2 993 aa20.43■□□□□ 0.86
HNRNPU-228ENST00000640306 FOXD4L5Q5VV16 416 aaPredicted RBP20.43■□□□□ 0.86
HNRNPU-228ENST00000640306 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.43■□□□□ 0.86
HNRNPU-228ENST00000640306 FOXD4L4Q8WXT5 416 aaPredicted RBP20.43■□□□□ 0.86
HNRNPU-228ENST00000640306 USP26Q9BXU7 913 aa20.43■□□□□ 0.86
HNRNPU-228ENST00000640306 KNDC1Q76NI1 1749 aa20.43■□□□□ 0.86
HNRNPU-228ENST00000640306 DLG5Q8TDM6 1919 aa20.43■□□□□ 0.86
HNRNPU-228ENST00000640306 INTS3Q68E01 1043 aaKnown RBP20.43■□□□□ 0.86
HNRNPU-228ENST00000640306 GOLGA6L22H0YM25 854 aa20.42■□□□□ 0.86
HNRNPU-228ENST00000640306 CLCN1P35523 988 aa20.42■□□□□ 0.86
HNRNPU-228ENST00000640306 C3P01024 1663 aa20.42■□□□□ 0.86
HNRNPU-228ENST00000640306 FER1L4A9Z1Z3 1794 aa20.42■□□□□ 0.86
HNRNPU-228ENST00000640306 ZGPATQ8N5A5 531 aaKnown RBP20.42■□□□□ 0.86
HNRNPU-228ENST00000640306 SLC26A8Q96RN1 970 aa20.42■□□□□ 0.86
HNRNPU-228ENST00000640306 ESPNB1AK53 854 aa20.41■□□□□ 0.86
HNRNPU-228ENST00000640306 SKOR2Q2VWA4 1001 aaPredicted RBP20.41■□□□□ 0.86
HNRNPU-228ENST00000640306 G2E3Q7L622 706 aa20.41■□□□□ 0.86
HNRNPU-228ENST00000640306 RABEP1Q15276 862 aa20.41■□□□□ 0.86
HNRNPU-228ENST00000640306 NECTIN2Q92692 538 aa20.41■□□□□ 0.86
HNRNPU-228ENST00000640306 AATKQ6ZMQ8 1374 aa20.4■□□□□ 0.86
HNRNPU-228ENST00000640306 UBR1Q8IWV7 1749 aa20.4■□□□□ 0.86
HNRNPU-228ENST00000640306 ATP10DQ9P241 1426 aa20.39■□□□□ 0.86
HNRNPU-228ENST00000640306 CHL1O00533 1208 aa20.39■□□□□ 0.85
HNRNPU-228ENST00000640306 RTL1A6NKG5 1358 aa20.38■□□□□ 0.85
HNRNPU-228ENST00000640306 NRXN3Q9Y4C0 1643 aa20.38■□□□□ 0.85
HNRNPU-228ENST00000640306 HDGFP51858 240 aaKnown RBP20.38■□□□□ 0.85
HNRNPU-228ENST00000640306 CAVIN1Q6NZI2 390 aaKnown RBP20.38■□□□□ 0.85
HNRNPU-228ENST00000640306 NOL8Q76FK4 1167 aaKnown RBP20.37■□□□□ 0.85
HNRNPU-228ENST00000640306 RPAP2Q8IXW5 612 aaPredicted RBP20.37■□□□□ 0.85
HNRNPU-228ENST00000640306 EXOC6BQ9Y2D4 811 aa20.37■□□□□ 0.85
HNRNPU-228ENST00000640306 RGS12O14924 1447 aa20.37■□□□□ 0.85
HNRNPU-228ENST00000640306 ACEP12821 1306 aa20.36■□□□□ 0.85
HNRNPU-228ENST00000640306 TTC21BQ7Z4L5 1316 aa20.36■□□□□ 0.85
HNRNPU-228ENST00000640306 NASPP49321 788 aaPredicted RBP20.36■□□□□ 0.85
HNRNPU-228ENST00000640306 DLC1Q96QB1 1528 aa20.35■□□□□ 0.85
HNRNPU-228ENST00000640306 CASC1Q6TDU7 716 aa20.35■□□□□ 0.85
HNRNPU-228ENST00000640306 TSPYL4Q9UJ04 414 aa20.35■□□□□ 0.85
HNRNPU-228ENST00000640306 ISY1Q9ULR0 285 aaKnown RBP20.34■□□□□ 0.85
HNRNPU-228ENST00000640306 PRPF40AO75400 957 aaKnown RBP20.33■□□□□ 0.85
HNRNPU-228ENST00000640306 KLHL40Q2TBA0 621 aa20.33■□□□□ 0.85
HNRNPU-228ENST00000640306 RBM27Q9P2N5 1060 aaKnown RBP20.33■□□□□ 0.85
HNRNPU-228ENST00000640306 SETD1AO15047 1707 aaKnown RBP20.33■□□□□ 0.85
HNRNPU-228ENST00000640306 EID1Q9Y6B2 187 aa20.33■□□□□ 0.85
HNRNPU-228ENST00000640306 MTHFSDQ2M296 383 aaKnown RBP20.33■□□□□ 0.84
HNRNPU-228ENST00000640306 ST18O60284 1047 aa20.32■□□□□ 0.84
HNRNPU-228ENST00000640306 ROBO2Q9HCK4 1378 aa20.32■□□□□ 0.84
HNRNPU-228ENST00000640306 RTF1Q92541 710 aaKnown RBP20.32■□□□□ 0.84
HNRNPU-228ENST00000640306 ADAMTS13Q76LX8 1427 aa20.32■□□□□ 0.84
HNRNPU-228ENST00000640306 PTMSP20962 102 aa20.31■□□□□ 0.84
HNRNPU-228ENST00000640306 MAP3K19Q56UN5 1328 aa20.31■□□□□ 0.84
HNRNPU-228ENST00000640306 NUCB2P80303 420 aa20.31■□□□□ 0.84
HNRNPU-228ENST00000640306 FOXD4L6Q3SYB3 417 aaPredicted RBP20.31■□□□□ 0.84
HNRNPU-228ENST00000640306 FOXD4L3Q6VB84 417 aaPredicted RBP20.31■□□□□ 0.84
HNRNPU-228ENST00000640306 RIMS1Q86UR5 1692 aaKnown RBP20.31■□□□□ 0.84
HNRNPU-228ENST00000640306 LMBRD1Q9NUN5 540 aa20.3■□□□□ 0.84
HNRNPU-228ENST00000640306 KIF24Q5T7B8 1368 aa20.3■□□□□ 0.84
HNRNPU-228ENST00000640306 NEK4P51957 841 aa20.3■□□□□ 0.84
HNRNPU-228ENST00000640306 PDE1AP54750 535 aa20.3■□□□□ 0.84
HNRNPU-228ENST00000640306 PTPRCP08575 1304 aa20.3■□□□□ 0.84
HNRNPU-228ENST00000640306 ERC2O15083 957 aa20.3■□□□□ 0.84
HNRNPU-228ENST00000640306 REC8O95072 547 aa20.29■□□□□ 0.84
HNRNPU-228ENST00000640306 HAP1P54257 671 aaPredicted RBP20.29■□□□□ 0.84
HNRNPU-228ENST00000640306 THEMISQ8N1K5 641 aaPredicted RBP20.29■□□□□ 0.84
HNRNPU-228ENST00000640306 RILPL2Q969X0 211 aa20.29■□□□□ 0.84
HNRNPU-228ENST00000640306 HMMRO75330 724 aa20.29■□□□□ 0.84
HNRNPU-228ENST00000640306 ZDHHC9Q9Y397 364 aa20.29■□□□□ 0.84
HNRNPU-228ENST00000640306 ZSCAN23Q3MJ62 389 aa20.28■□□□□ 0.84
HNRNPU-228ENST00000640306 TRIM6-TRIM34B2RNG4 842 aa20.28■□□□□ 0.84
HNRNPU-228ENST00000640306 NUTM2GQ5VZR2 741 aa20.28■□□□□ 0.84
HNRNPU-228ENST00000640306 FKBP5Q13451 457 aaPredicted RBP20.27■□□□□ 0.84
HNRNPU-228ENST00000640306 ANP32BQ92688 251 aaKnown RBP20.27■□□□□ 0.84
HNRNPU-228ENST00000640306 PLEKHG1Q9ULL1 1385 aa20.27■□□□□ 0.84
HNRNPU-228ENST00000640306 CYP2E1P05181 493 aaPredicted RBP20.27■□□□□ 0.84
HNRNPU-228ENST00000640306 PNMA6EA0A0J9YXQ4 647 aa20.26■□□□□ 0.83
HNRNPU-228ENST00000640306 CLEC17AQ6ZS10 378 aa20.26■□□□□ 0.83
HNRNPU-228ENST00000640306 TPRNQ4KMQ1 711 aa20.26■□□□□ 0.83
HNRNPU-228ENST00000640306 GPT2Q8TD30 523 aa20.26■□□□□ 0.83
HNRNPU-228ENST00000640306 PALD1Q9ULE6 856 aa20.26■□□□□ 0.83
HNRNPU-228ENST00000640306 NSFL1CQ9UNZ2 370 aaKnown RBP20.26■□□□□ 0.83
HNRNPU-228ENST00000640306 KIAA0232Q92628 1395 aa20.25■□□□□ 0.83
HNRNPU-228ENST00000640306 PRIM1P49642 420 aaKnown RBP20.25■□□□□ 0.83
HNRNPU-228ENST00000640306 ANO2Q9NQ90 1003 aa20.25■□□□□ 0.83
HNRNPU-228ENST00000640306 CRB1P82279 1406 aa20.25■□□□□ 0.83
HNRNPU-228ENST00000640306 AMPHP49418 695 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms