RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 PDIA4P13667 645 aaKnown RBP13.17□□□□□ -0.3
SCN1B-208ENST00000640135 KRT32Q14532 448 aa13.17□□□□□ -0.3
SCN1B-208ENST00000640135 BICDL1Q6ZP65 573 aa13.17□□□□□ -0.3
SCN1B-208ENST00000640135 SIL1Q9H173 461 aa13.17□□□□□ -0.3
SCN1B-208ENST00000640135 PDZRN3Q9UPQ7 1066 aa13.17□□□□□ -0.3
SCN1B-208ENST00000640135 AACSQ86V21 672 aa13.17□□□□□ -0.3
SCN1B-208ENST00000640135 PCMTD1Q96MG8 357 aaPredicted RBP13.17□□□□□ -0.3
SCN1B-208ENST00000640135 SMARCC1Q92922 1105 aaPredicted RBP13.16□□□□□ -0.3
SCN1B-208ENST00000640135 EMILIN1Q9Y6C2 1016 aa13.16□□□□□ -0.3
SCN1B-208ENST00000640135 SLFN5Q08AF3 891 aa13.16□□□□□ -0.3
SCN1B-208ENST00000640135 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
SCN1B-208ENST00000640135 RRP12Q5JTH9 1297 aaKnown RBP13.16□□□□□ -0.3
SCN1B-208ENST00000640135 JMYQ8N9B5 988 aa13.16□□□□□ -0.3
SCN1B-208ENST00000640135 KIF1BPQ96EK5 621 aa13.16□□□□□ -0.3
SCN1B-208ENST00000640135 LRP2BPQ9P2M1 347 aa13.16□□□□□ -0.3
SCN1B-208ENST00000640135 METTL24Q5JXM2 366 aa13.16□□□□□ -0.3
SCN1B-208ENST00000640135 SASS6Q6UVJ0 657 aa13.16□□□□□ -0.3
SCN1B-208ENST00000640135 SLF2Q8IX21 1173 aa13.16□□□□□ -0.3
SCN1B-208ENST00000640135 ANKRD24Q8TF21 1146 aa13.16□□□□□ -0.3
SCN1B-208ENST00000640135 CYP46A1Q9Y6A2 500 aa13.16□□□□□ -0.3
SCN1B-208ENST00000640135 DNAJC5Q9H3Z4 198 aa13.15□□□□□ -0.3
SCN1B-208ENST00000640135 RAI14Q9P0K7 980 aa13.15□□□□□ -0.3
SCN1B-208ENST00000640135 DISP1Q96F81 1524 aa13.15□□□□□ -0.3
SCN1B-208ENST00000640135 WWC2Q6AWC2 1192 aa13.15□□□□□ -0.3
SCN1B-208ENST00000640135 CCDC70Q6NSX1 233 aa13.15□□□□□ -0.3
SCN1B-208ENST00000640135 MCM10Q7L590 875 aa13.15□□□□□ -0.3
SCN1B-208ENST00000640135 AK7Q96M32 723 aa13.15□□□□□ -0.3
SCN1B-208ENST00000640135 BCAR3O75815 825 aa13.15□□□□□ -0.3
SCN1B-208ENST00000640135 CDKL5O76039 1030 aa13.15□□□□□ -0.3
SCN1B-208ENST00000640135 IFIT5Q13325 482 aaKnown RBP13.15□□□□□ -0.3
SCN1B-208ENST00000640135 FKBP4Q02790 459 aaKnown RBP eCLIP13.14□□□□□ -0.31
SCN1B-208ENST00000640135 FOXD4L6Q3SYB3 417 aaPredicted RBP13.14□□□□□ -0.31
SCN1B-208ENST00000640135 FOXD4L3Q6VB84 417 aaPredicted RBP13.14□□□□□ -0.31
SCN1B-208ENST00000640135 NAT10Q9H0A0 1025 aaKnown RBP13.14□□□□□ -0.31
SCN1B-208ENST00000640135 ZNF396Q96N95 335 aaPredicted RBP13.14□□□□□ -0.31
SCN1B-208ENST00000640135 SYCP2Q9BX26 1530 aa13.14□□□□□ -0.31
SCN1B-208ENST00000640135 SOGA3Q5TF21 947 aa13.14□□□□□ -0.31
SCN1B-208ENST00000640135 ZSCAN29Q8IWY8 852 aaPredicted RBP13.14□□□□□ -0.31
SCN1B-208ENST00000640135 LRRC59Q96AG4 307 aaKnown RBP13.14□□□□□ -0.31
SCN1B-208ENST00000640135 C1orf115Q9H7X2 142 aa13.14□□□□□ -0.31
SCN1B-208ENST00000640135 ZMYM3Q14202 1370 aa13.13□□□□□ -0.31
SCN1B-208ENST00000640135 NEK4P51957 841 aa13.13□□□□□ -0.31
SCN1B-208ENST00000640135 RPGRQ92834 1020 aaKnown RBP13.13□□□□□ -0.31
SCN1B-208ENST00000640135 TRMT112Q9UI30 125 aaKnown RBP13.13□□□□□ -0.31
SCN1B-208ENST00000640135 CCDC69A6NI79 296 aa13.13□□□□□ -0.31
SCN1B-208ENST00000640135 GOLGA6L1Q8N7Z2 621 aa13.13□□□□□ -0.31
SCN1B-208ENST00000640135 DNAAF4Q8WXU2 420 aa13.13□□□□□ -0.31
SCN1B-208ENST00000640135 CDK5RAP3Q96JB5 506 aa13.13□□□□□ -0.31
SCN1B-208ENST00000640135 PTPRCP08575 1304 aa13.13□□□□□ -0.31
SCN1B-208ENST00000640135 GLRX3O76003 335 aaKnown RBP13.13□□□□□ -0.31
SCN1B-208ENST00000640135 TDO2P48775 406 aa13.13□□□□□ -0.31
SCN1B-208ENST00000640135 PPP1R42Q7Z4L9 355 aa13.13□□□□□ -0.31
SCN1B-208ENST00000640135 PRM3Q9NNZ6 103 aa13.13□□□□□ -0.31
SCN1B-208ENST00000640135 MTMR7Q9Y216 660 aa13.13□□□□□ -0.31
SCN1B-208ENST00000640135 TRAPPC8Q9Y2L5 1435 aa13.13□□□□□ -0.31
SCN1B-208ENST00000640135 ATP2B2Q01814 1243 aa13.13□□□□□ -0.31
SCN1B-208ENST00000640135 OLFM4Q6UX06 510 aa13.13□□□□□ -0.31
SCN1B-208ENST00000640135 PIP4K2AP48426 406 aaPredicted RBP13.12□□□□□ -0.31
SCN1B-208ENST00000640135 CDC5LQ99459 802 aaKnown RBP13.12□□□□□ -0.31
SCN1B-208ENST00000640135 UBAC1Q9BSL1 405 aa13.12□□□□□ -0.31
SCN1B-208ENST00000640135 IL16Q14005 1332 aa13.12□□□□□ -0.31
SCN1B-208ENST00000640135 A0A0U1RQG5 324 aaPredicted RBP13.12□□□□□ -0.31
SCN1B-208ENST00000640135 SNRPA1P09661 255 aaKnown RBP13.12□□□□□ -0.31
SCN1B-208ENST00000640135 CHD1LQ86WJ1 897 aa13.12□□□□□ -0.31
SCN1B-208ENST00000640135 CNKSR2Q8WXI2 1034 aa13.12□□□□□ -0.31
SCN1B-208ENST00000640135 USHBP1Q8N6Y0 703 aa13.12□□□□□ -0.31
SCN1B-208ENST00000640135 SHANK2Q9UPX8 1470 aa13.12□□□□□ -0.31
SCN1B-208ENST00000640135 ANKRD18BA2A2Z9 1011 aa13.11□□□□□ -0.31
SCN1B-208ENST00000640135 AEBP1Q8IUX7 1158 aa13.11□□□□□ -0.31
SCN1B-208ENST00000640135 SDF4Q9BRK5 362 aa13.11□□□□□ -0.31
SCN1B-208ENST00000640135 ZCRB1Q8TBF4 217 aaKnown RBP13.11□□□□□ -0.31
SCN1B-208ENST00000640135 AIDAQ96BJ3 306 aa13.11□□□□□ -0.31
SCN1B-208ENST00000640135 MYD88Q99836 296 aa13.11□□□□□ -0.31
SCN1B-208ENST00000640135 SLC5A1P13866 664 aa13.11□□□□□ -0.31
SCN1B-208ENST00000640135 ZSCAN31Q96LW9 406 aaPredicted RBP13.1□□□□□ -0.31
SCN1B-208ENST00000640135 BCL11BQ9C0K0 894 aaPredicted RBP13.1□□□□□ -0.31
SCN1B-208ENST00000640135 ATP10AO60312 1499 aa13.1□□□□□ -0.31
SCN1B-208ENST00000640135 LETM1O95202 739 aaPredicted RBP13.1□□□□□ -0.31
SCN1B-208ENST00000640135 WASF1Q92558 559 aa13.1□□□□□ -0.31
SCN1B-208ENST00000640135 ANKIB1Q9P2G1 1089 aa13.1□□□□□ -0.31
SCN1B-208ENST00000640135 BLOC1S2Q6QNY1 142 aa13.1□□□□□ -0.31
SCN1B-208ENST00000640135 NOL7Q9UMY1 257 aaKnown RBP13.1□□□□□ -0.31
SCN1B-208ENST00000640135 UHRF1BP1Q6BDS2 1440 aa13.1□□□□□ -0.31
SCN1B-208ENST00000640135 IDH1O75874 414 aaKnown RBP13.09□□□□□ -0.31
SCN1B-208ENST00000640135 MBD3O95983 291 aa13.09□□□□□ -0.31
SCN1B-208ENST00000640135 MAP3K12Q12852 859 aa13.09□□□□□ -0.31
SCN1B-208ENST00000640135 CDCA7Q9BWT1 371 aaPredicted RBP13.09□□□□□ -0.31
SCN1B-208ENST00000640135 LDHCP07864 332 aa13.09□□□□□ -0.31
SCN1B-208ENST00000640135 RFC4P35249 363 aa13.09□□□□□ -0.31
SCN1B-208ENST00000640135 EPS15P42566 896 aa13.09□□□□□ -0.31
SCN1B-208ENST00000640135 IMMTQ16891 758 aaKnown RBP13.09□□□□□ -0.31
SCN1B-208ENST00000640135 ABCF2Q9UG63 623 aa13.09□□□□□ -0.31
SCN1B-208ENST00000640135 TRPM2O94759 1503 aa13.08□□□□□ -0.32
SCN1B-208ENST00000640135 KINO60870 393 aaKnown RBP13.08□□□□□ -0.32
SCN1B-208ENST00000640135 MIS18AQ9NYP9 233 aa13.08□□□□□ -0.32
SCN1B-208ENST00000640135 DDB1Q16531 1140 aa13.08□□□□□ -0.32
SCN1B-208ENST00000640135 DDX46Q7L014 1031 aaKnown RBP13.08□□□□□ -0.32
SCN1B-208ENST00000640135 CWC25Q9NXE8 425 aaPredicted RBP13.08□□□□□ -0.32
SCN1B-208ENST00000640135 U3KPZ7 1027 aaPredicted RBP13.08□□□□□ -0.32
SCN1B-208ENST00000640135 TMEM57Q8N5G2 664 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms