RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 VAMP4O75379 141 aa15.43■□□□□ 0.06
SPIN3-236ENST00000640131 TWISTNBQ3B726 338 aaPredicted RBP15.43■□□□□ 0.06
SPIN3-236ENST00000640131 CDK12Q9NYV4 1490 aaPredicted RBP15.43■□□□□ 0.06
SPIN3-236ENST00000640131 FER1L4A9Z1Z3 1794 aa15.43■□□□□ 0.06
SPIN3-236ENST00000640131 TEX2Q8IWB9 1127 aa15.42■□□□□ 0.06
SPIN3-236ENST00000640131 SECISBP2LQ93073 1101 aaKnown RBP15.42■□□□□ 0.06
SPIN3-236ENST00000640131 DDX19BQ9UMR2 479 aa15.42■□□□□ 0.06
SPIN3-236ENST00000640131 USP6P35125 1406 aa15.41■□□□□ 0.06
SPIN3-236ENST00000640131 MAP3K19Q56UN5 1328 aa15.41■□□□□ 0.06
SPIN3-236ENST00000640131 KIF16BQ96L93 1317 aa15.41■□□□□ 0.06
SPIN3-236ENST00000640131 FSD2A1L4K1 749 aa15.41■□□□□ 0.06
SPIN3-236ENST00000640131 NLRP6P59044 892 aa15.41■□□□□ 0.06
SPIN3-236ENST00000640131 GNAI1P63096 354 aa15.41■□□□□ 0.06
SPIN3-236ENST00000640131 THEMISQ8N1K5 641 aaPredicted RBP15.41■□□□□ 0.06
SPIN3-236ENST00000640131 LNPKQ9C0E8 428 aa15.41■□□□□ 0.06
SPIN3-236ENST00000640131 AMPHP49418 695 aa15.4■□□□□ 0.06
SPIN3-236ENST00000640131 RIMS1Q86UR5 1692 aaKnown RBP15.4■□□□□ 0.06
SPIN3-236ENST00000640131 CT47B1P0C2W7 299 aaPredicted RBP15.4■□□□□ 0.06
SPIN3-236ENST00000640131 IPO8O15397 1037 aaKnown RBP15.4■□□□□ 0.06
SPIN3-236ENST00000640131 SIRT1Q96EB6 747 aa15.4■□□□□ 0.06
SPIN3-236ENST00000640131 AATKQ6ZMQ8 1374 aa15.4■□□□□ 0.06
SPIN3-236ENST00000640131 MRPL50Q8N5N7 158 aaKnown RBP15.39■□□□□ 0.05
SPIN3-236ENST00000640131 SPRYD3Q8NCJ5 442 aa15.39■□□□□ 0.05
SPIN3-236ENST00000640131 PLEKHG3A1L390 1219 aa15.38■□□□□ 0.05
SPIN3-236ENST00000640131 XPCQ01831 940 aaPredicted RBP15.38■□□□□ 0.05
SPIN3-236ENST00000640131 USHBP1Q8N6Y0 703 aa15.38■□□□□ 0.05
SPIN3-236ENST00000640131 NECTIN2Q92692 538 aa15.38■□□□□ 0.05
SPIN3-236ENST00000640131 TRIM44Q96DX7 344 aaPredicted RBP15.38■□□□□ 0.05
SPIN3-236ENST00000640131 IFT57Q9NWB7 429 aa15.38■□□□□ 0.05
SPIN3-236ENST00000640131 USP19O94966 1318 aa15.38■□□□□ 0.05
SPIN3-236ENST00000640131 ZBTB40Q9NUA8 1239 aa15.38■□□□□ 0.05
SPIN3-236ENST00000640131 PEAK1Q9H792 1746 aa15.37■□□□□ 0.05
SPIN3-236ENST00000640131 CFAP44Q96MT7 982 aa15.37■□□□□ 0.05
SPIN3-236ENST00000640131 MFAP1P55081 439 aaKnown RBP15.37■□□□□ 0.05
SPIN3-236ENST00000640131 TBX22Q9Y458 520 aa15.37■□□□□ 0.05
SPIN3-236ENST00000640131 OVOS2A0A0J9YW53 1432 aa15.36■□□□□ 0.05
SPIN3-236ENST00000640131 OVOS2Q6IE36 1432 aa15.36■□□□□ 0.05
SPIN3-236ENST00000640131 APBB1O00213 710 aa15.36■□□□□ 0.05
SPIN3-236ENST00000640131 ALDH1L2Q3SY69 923 aa15.36■□□□□ 0.05
SPIN3-236ENST00000640131 ABTB2Q8N961 1025 aa15.36■□□□□ 0.05
SPIN3-236ENST00000640131 ZNF853P0CG23 659 aa15.35■□□□□ 0.05
SPIN3-236ENST00000640131 CHRM1P11229 460 aaPredicted RBP15.35■□□□□ 0.05
SPIN3-236ENST00000640131 SLKQ9H2G2 1235 aaPredicted RBP15.35■□□□□ 0.05
SPIN3-236ENST00000640131 ZSCAN20P17040 1043 aaPredicted RBP15.35■□□□□ 0.05
SPIN3-236ENST00000640131 MTHFSDQ2M296 383 aaKnown RBP15.35■□□□□ 0.05
SPIN3-236ENST00000640131 MRE11P49959 708 aa15.34■□□□□ 0.05
SPIN3-236ENST00000640131 LMOD3Q0VAK6 560 aa15.34■□□□□ 0.05
SPIN3-236ENST00000640131 LMOD2Q6P5Q4 547 aa15.34■□□□□ 0.05
SPIN3-236ENST00000640131 DIP2AQ14689 1571 aa15.34■□□□□ 0.05
SPIN3-236ENST00000640131 ANKRD45Q5TZF3 282 aa15.34■□□□□ 0.05
SPIN3-236ENST00000640131 MTERF4Q7Z6M4 381 aaKnown RBP15.34■□□□□ 0.05
SPIN3-236ENST00000640131 GZF1Q9H116 711 aaPredicted RBP15.34■□□□□ 0.05
SPIN3-236ENST00000640131 EYA1Q99502 592 aa15.33■□□□□ 0.05
SPIN3-236ENST00000640131 NRKQ7Z2Y5 1582 aa15.33■□□□□ 0.04
SPIN3-236ENST00000640131 TOPAZ1Q8N9V7 1692 aa15.33■□□□□ 0.04
SPIN3-236ENST00000640131 VIRMAQ69YN4 1812 aaKnown RBP15.33■□□□□ 0.04
SPIN3-236ENST00000640131 KIF20AO95235 890 aa15.33■□□□□ 0.04
SPIN3-236ENST00000640131 CDK11BP21127 795 aaKnown RBP15.33■□□□□ 0.04
SPIN3-236ENST00000640131 ZBTB7BO15156 539 aaPredicted RBP15.32■□□□□ 0.04
SPIN3-236ENST00000640131 TERF1P54274 439 aa15.32■□□□□ 0.04
SPIN3-236ENST00000640131 HDAC1Q13547 482 aaPredicted RBP15.31■□□□□ 0.04
SPIN3-236ENST00000640131 OFD1O75665 1012 aa15.31■□□□□ 0.04
SPIN3-236ENST00000640131 SLC4A10Q6U841 1118 aa15.31■□□□□ 0.04
SPIN3-236ENST00000640131 SAMD1Q6SPF0 538 aaPredicted RBP15.3■□□□□ 0.04
SPIN3-236ENST00000640131 RTF1Q92541 710 aaKnown RBP15.3■□□□□ 0.04
SPIN3-236ENST00000640131 F6X3S4 739 aa15.3■□□□□ 0.04
SPIN3-236ENST00000640131 ESCO1Q5FWF5 840 aa15.3■□□□□ 0.04
SPIN3-236ENST00000640131 SIRT2Q8IXJ6 389 aa15.3■□□□□ 0.04
SPIN3-236ENST00000640131 TSPYL4Q9UJ04 414 aa15.3■□□□□ 0.04
SPIN3-236ENST00000640131 SLIT1O75093 1534 aa15.3■□□□□ 0.04
SPIN3-236ENST00000640131 ARHGAP23Q9P227 1491 aa15.3■□□□□ 0.04
SPIN3-236ENST00000640131 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.3■□□□□ 0.04
SPIN3-236ENST00000640131 UPF2Q9HAU5 1272 aaKnown RBP15.3■□□□□ 0.04
SPIN3-236ENST00000640131 CEP170BQ9Y4F5 1589 aaPredicted RBP15.29■□□□□ 0.04
SPIN3-236ENST00000640131 SMC5Q8IY18 1101 aa15.29■□□□□ 0.04
SPIN3-236ENST00000640131 DNTTIP2Q5QJE6 756 aaKnown RBP15.28■□□□□ 0.04
SPIN3-236ENST00000640131 G2E3Q7L622 706 aa15.28■□□□□ 0.04
SPIN3-236ENST00000640131 SLC4A2P04920 1241 aa15.28■□□□□ 0.04
SPIN3-236ENST00000640131 PIK3C2AO00443 1686 aa15.28■□□□□ 0.04
SPIN3-236ENST00000640131 FLT4P35916 1363 aa15.27■□□□□ 0.04
SPIN3-236ENST00000640131 CHD1LQ86WJ1 897 aa15.27■□□□□ 0.04
SPIN3-236ENST00000640131 GTPBP4Q9BZE4 634 aaKnown RBP15.27■□□□□ 0.04
SPIN3-236ENST00000640131 GRPEL1Q9HAV7 217 aa15.27■□□□□ 0.04
SPIN3-236ENST00000640131 SSH2Q76I76 1423 aa15.27■□□□□ 0.04
SPIN3-236ENST00000640131 ANKLE2Q86XL3 938 aa15.27■□□□□ 0.03
SPIN3-236ENST00000640131 TTC21AQ8NDW8 1320 aa15.27■□□□□ 0.03
SPIN3-236ENST00000640131 CHL1O00533 1208 aa15.27■□□□□ 0.03
SPIN3-236ENST00000640131 LETM1O95202 739 aaPredicted RBP15.27■□□□□ 0.03
SPIN3-236ENST00000640131 HOXC9P31274 260 aa15.27■□□□□ 0.03
SPIN3-236ENST00000640131 R3HCC1Q9Y3T6 440 aaKnown RBP15.27■□□□□ 0.03
SPIN3-236ENST00000640131 USP31Q70CQ4 1352 aa15.26■□□□□ 0.03
SPIN3-236ENST00000640131 HAP1P54257 671 aaPredicted RBP15.26■□□□□ 0.03
SPIN3-236ENST00000640131 PHF8Q9UPP1 1060 aa15.26■□□□□ 0.03
SPIN3-236ENST00000640131 ABCC4O15439 1325 aa15.26■□□□□ 0.03
SPIN3-236ENST00000640131 PTCH1Q13635 1447 aa15.26■□□□□ 0.03
SPIN3-236ENST00000640131 IRX3P78415 501 aaPredicted RBP15.26■□□□□ 0.03
SPIN3-236ENST00000640131 NUCB1Q02818 461 aa15.26■□□□□ 0.03
SPIN3-236ENST00000640131 CCDC94Q9BW85 323 aaPredicted RBP15.26■□□□□ 0.03
SPIN3-236ENST00000640131 SBNO1A3KN83 1393 aa15.25■□□□□ 0.03
SPIN3-236ENST00000640131 ZBTB22O15209 634 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms